RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 TNFRSF25Q93038 417 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ANKZF1Q9H8Y5 726 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.34
CDK5RAP3-231ENST00000584063 A0A1B0GTH6 734 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 C21orf2O43822 256 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 ERVK-24P63145 666 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 DHX8Q14562 1220 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 RCSD1Q6JBY9 416 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 FOXR1Q6PIV2 292 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 KIAA0825Q8IV33 1275 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 FMNL3Q8IVF7 1028 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 TEX11Q8IYF3 940 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 YIPF2Q9BWQ6 316 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 RABEP2Q9H5N1 569 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 ADAM21Q9UKJ8 722 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 TTF2Q9UNY4 1162 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 PRPF3O43395 683 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 HIP1RO75146 1068 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 ZBTB7AO95365 584 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 MYH8P13535 1937 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 TXLNAP40222 546 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 NLRP5P59047 1200 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 C10orf62Q5T681 223 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 GSPT2Q8IYD1 628 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 RASSF8Q8NHQ8 419 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 CD248Q9HCU0 757 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 IRS2Q9Y4H2 1338 aa12.89□□□□□ -0.35
CDK5RAP3-231ENST00000584063 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 BAG6P46379 1132 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 VSNL1P62760 191 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 PPARDQ03181 441 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 KRT31Q15323 416 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 KCTD19Q17RG1 926 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 NT5DC1Q5TFE4 455 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 C10orf67Q8IYJ2 551 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 UTP6Q9NYH9 597 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 TMOD4Q9NZQ9 345 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 ADD3Q9UEY8 706 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 GJA3Q9Y6H8 435 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 LDHCP07864 332 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 NEFHP12036 1026 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 MAGEA8P43361 318 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 GSTO1P78417 241 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 RAD51AP2Q09MP3 1159 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 NAALADL2Q58DX5 795 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 JAKMIP3Q5VZ66 844 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 KCNV1Q6PIU1 500 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SND1Q7KZF4 910 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 MYO1HQ8N1T3 1032 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 CALCOCO1Q9P1Z2 691 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 N6AMT1Q9Y5N5 214 aa12.88□□□□□ -0.35
CDK5RAP3-231ENST00000584063 A6NJR5 290 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 MFAP3LO75121 409 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 CACNB3P54284 484 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 TFAP4Q01664 338 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 PTPROQ16827 1216 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 TTC19Q6DKK2 380 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 ATP8A2Q9NTI2 1148 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 KLRG2A4D1S0 409 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 IL4RP24394 825 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 KRT9P35527 623 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 LRRC15Q8TF66 581 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 RIN2Q8WYP3 895 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 CENPOQ9BU64 300 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 TNS1Q9HBL0 1735 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 MYH6P13533 1939 aa12.87□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SLURP2P0DP57 97 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 IL1R1P14778 569 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 KLK7P49862 253 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 IGBP1P78318 339 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 PPP2R5BQ15173 497 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 AOC3Q16853 763 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SPATA20Q8TB22 786 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 RABGGTAQ92696 567 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SCG2P13521 617 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 UBXN1Q04323 297 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SH3RF1Q7Z6J0 888 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 FCHSD1Q86WN1 690 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 CERS5Q8N5B7 392 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SERPINA10Q9UK55 444 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 CEP131Q9UPN4 1083 aa12.86□□□□□ -0.35
CDK5RAP3-231ENST00000584063 SLC45A1Q9Y2W3 748 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms