RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CEP131Q9UPN4 1083 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 BMP15O95972 392 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 EDNRBP24530 442 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 CIITAP33076 1130 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 LBX1P52954 281 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 LETM2Q2VYF4 491 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 PPP4R3AQ6IN85 833 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 OTOP1Q7RTM1 612 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 NIPA1Q7RTP0 329 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 SLAIN1Q8ND83 568 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 NPLOC4Q8TAT6 608 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 CFAP45Q9UL16 551 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 GABRQQ9UN88 632 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 PCNTO95613 3336 aa16.24■□□□□ 0.19
SKA2-205ENST00000580541 PLXNA1Q9UIW2 1896 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 CEP350Q5VT06 3117 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 CYP3A7-CYP3A51PA0A087WV96 503 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 ADCY3O60266 1144 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 MARCH6O60337 910 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 CCNT1O60563 726 aaKnown RBP16.23■□□□□ 0.19
SKA2-205ENST00000580541 TGFB3P10600 412 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 CYP3A7P24462 503 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 SETQ01105 290 aaPredicted RBP16.23■□□□□ 0.19
SKA2-205ENST00000580541 RESTQ13127 1097 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 CEP55Q53EZ4 464 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 ARMCX2Q7L311 632 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 CTU1Q7Z7A3 348 aaKnown RBP16.23■□□□□ 0.19
SKA2-205ENST00000580541 PURBQ96QR8 312 aaKnown RBP16.23■□□□□ 0.19
SKA2-205ENST00000580541 VTA1Q9NP79 307 aa16.23■□□□□ 0.19
SKA2-205ENST00000580541 CASP8AP2Q9UKL3 1982 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 KIF28PB7ZC32 967 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 BAG4O95429 457 aaKnown RBP16.22■□□□□ 0.19
SKA2-205ENST00000580541 UBXN2AP68543 259 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 TTC38Q5R3I4 469 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 FOXD4L5Q5VV16 416 aaPredicted RBP16.22■□□□□ 0.19
SKA2-205ENST00000580541 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 CRYGNQ8WXF5 182 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 FOXD4L4Q8WXT5 416 aaPredicted RBP16.22■□□□□ 0.19
SKA2-205ENST00000580541 GPRASP2Q96D09 838 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 MXRA8Q9BRK3 442 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 PRDM10Q9NQV6 1147 aa16.22■□□□□ 0.19
SKA2-205ENST00000580541 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
SKA2-205ENST00000580541 MEIS1O00470 390 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 LAD1O00515 517 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 ADAMTS3O15072 1205 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 ATP2B1P20020 1258 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 Q4G0T1 1027 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 GIMAP8Q8ND71 665 aaPredicted RBP16.21■□□□□ 0.19
SKA2-205ENST00000580541 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 RTEL1Q9NZ71 1219 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 DDX25Q9UHL0 483 aaKnown RBP16.21■□□□□ 0.19
SKA2-205ENST00000580541 PTPN22Q9Y2R2 807 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 UBIAD1Q9Y5Z9 338 aa16.21■□□□□ 0.19
SKA2-205ENST00000580541 MYH7BA7E2Y1 1941 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 TBX3O15119 743 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 FIBPO43427 364 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 HMGCRP04035 888 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 GRK4P32298 578 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 MRPS9P82933 396 aaKnown RBP16.2■□□□□ 0.18
SKA2-205ENST00000580541 MTMR1Q13613 665 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 ACVR2BQ13705 512 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 PKP1Q13835 747 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 TTLL4Q14679 1199 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 PRR16Q569H4 304 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 EARS2Q5JPH6 523 aaKnown RBP16.2■□□□□ 0.18
SKA2-205ENST00000580541 IQSEC1Q6DN90 963 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 PLA2G4DQ86XP0 818 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 SLFN12Q8IYM2 578 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 SCFD2Q8WU76 684 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 FGD4Q96M96 766 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 INPP4AQ96PE3 977 aaPredicted RBP16.2■□□□□ 0.18
SKA2-205ENST00000580541 TCEAL9Q9UHQ7 104 aa16.2■□□□□ 0.18
SKA2-205ENST00000580541 NEMFO60524 1076 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 SNAI1O95863 264 aaPredicted RBP16.19■□□□□ 0.18
SKA2-205ENST00000580541 ICAM3P32942 547 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 MCM7P33993 719 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 KRT85P78386 507 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 ZNF174Q15697 407 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 FAM20AQ96MK3 541 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 ASTN1O14525 1302 aa16.19■□□□□ 0.18
SKA2-205ENST00000580541 NKRFO15226 690 aaKnown RBP eCLIP16.18■□□□□ 0.18
SKA2-205ENST00000580541 CYP2C19P33261 490 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 TOB1P50616 345 aaPredicted RBP16.18■□□□□ 0.18
SKA2-205ENST00000580541 NEDD9Q14511 834 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 CALCRLQ16602 461 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 CCL14Q16627 93 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 FBXO46Q6PJ61 603 aaPredicted RBP16.18■□□□□ 0.18
SKA2-205ENST00000580541 EEPD1Q7L9B9 569 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 IL31RAQ8NI17 732 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 TRIB2Q92519 343 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 MBOAT7Q96N66 472 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 SENP7Q9BQF6 1050 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 KCNH7Q9NS40 1196 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 TBC1D22BQ9NU19 505 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 FLRT1Q9NZU1 646 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms