RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 MTMR8Q96EF0 704 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 ZSCAN10Q96SZ4 725 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 PTPRSQ13332 1948 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 ERVK-21P61565 698 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 IMMTQ16891 758 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 ADGRF4Q8IZF3 695 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 KAT2BQ92831 832 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 HLA-CQ95604 372 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 RAD9AQ99638 391 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 AMNQ9BXJ7 453 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 NEDD4P46934 1319 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 TLL1O43897 1013 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 PPFIA4O75335 1185 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 ARIH2O95376 493 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 PLA2G5P39877 138 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 C7orf31Q8N865 590 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 RMDN3Q96TC7 470 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 IKBKEQ14164 716 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 MFSD10Q14728 455 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 QRICH1Q2TAL8 776 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-214ENST00000578112 TRIM6-TRIM34B2RNG4 842 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 CKBP12277 381 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 MYOGP15173 224 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 GRB10Q13322 594 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 GDF6Q6KF10 455 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 COPS5Q92905 334 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 MYH6P13533 1939 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 GJB5O95377 273 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 USH1GQ495M9 461 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 STOX1Q6ZVD7 989 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 CTAGE1Q96RT6 745 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.32
SMARCE1-214ENST00000578112 LGR5O75473 907 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 RPLP2P05387 115 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 NR3C2P08235 984 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 PTGS1P23219 599 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 HOXC8P31273 242 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 SEPT14Q6ZU15 432 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 DHX37Q8IY37 1157 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 DHX38Q92620 1227 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 DIAPH3Q9NSV4 1193 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 DDX49Q9Y6V7 483 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 FRMPD4Q14CM0 1322 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 RALGAPA2Q2PPJ7 1873 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 AMHP03971 560 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 HAND2P61296 217 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 TEX2Q8IWB9 1127 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 ENAHQ8N8S7 591 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 APBB2Q92870 758 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 UBAC1Q9BSL1 405 aa13.07□□□□□ -0.32
SMARCE1-214ENST00000578112 ZBTB5O15062 677 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 LPXNO60711 386 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 KDM4AO75164 1064 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 CCND2P30279 289 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 ICAM3P32942 547 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 HTRA4P83105 476 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 LY6KQ17RY6 165 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 CELF3Q5SZQ8 465 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 ARNTL2Q8WYA1 636 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 FAM122AQ96E09 287 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 CRBNQ96SW2 442 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 PDCD2LQ9BRP1 358 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 COL20A1Q9P218 1284 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 GNAT1P11488 350 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 NUCB1Q02818 461 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 GPNMBQ14956 572 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 SKIV2LQ15477 1246 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 PTPROQ16827 1216 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 LEXMQ3ZCV2 418 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 TRAF7Q6Q0C0 670 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 SERINC5Q86VE9 423 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 VSIG10LQ86VR7 867 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 MAP3K14Q99558 947 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 MTA3Q9BTC8 594 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 HDAC6Q9UBN7 1215 aa13.06□□□□□ -0.32
SMARCE1-214ENST00000578112 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 NCK2O43639 380 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 GPR37L1O60883 481 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 SMARCA1P28370 1054 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 GNPTABQ3T906 1256 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms