RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 QRICH1Q2TAL8 776 aa16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 CNKSR3Q6P9H4 555 aa16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 CWC27Q6UX04 472 aaKnown RBP16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 EMID1Q96A84 441 aaPredicted RBP16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 DSCC1Q9BVC3 393 aa16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 C1QTNF1Q9BXJ1 281 aa16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
SMARCD2-205ENST00000577686 TANC1Q9C0D5 1861 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 ABHD14A-ACY1A0A1B0GW23 586 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 B4E1Z4 1266 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 CFBP00751 764 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 EIF2AK2P19525 551 aaKnown RBP16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 RBL2Q08999 1139 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 TRDNQ13061 729 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 LY6KQ17RY6 165 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 IFIT1BQ5T764 474 aaKnown RBP16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 VWCEQ96DN2 955 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 TAAR1Q96RJ0 339 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 OSBPL3Q9H4L5 887 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 GTF2IRD1Q9UHL9 959 aa16.54■□□□□ 0.24
SMARCD2-205ENST00000577686 PSEN2P49810 448 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 TAP1Q03518 808 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 PTK7Q13308 1070 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 IKBKEQ14164 716 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 GDF6Q6KF10 455 aaPredicted RBP16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 SMC5Q8IY18 1101 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 ENAHQ8N8S7 591 aaPredicted RBP16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 HLA-CQ95604 372 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 CERS4Q9HA82 394 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 LMCD1Q9NZU5 365 aa16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 DDX41Q9UJV9 622 aaKnown RBP16.53■□□□□ 0.24
SMARCD2-205ENST00000577686 GBF1Q92538 1859 aa16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 EMSYQ7Z589 1322 aa16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 F2P00734 622 aa16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 NR3C2P08235 984 aa16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 MFSD10Q14728 455 aa16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 ALG1Q9BT22 464 aa16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 PXMP2Q9NR77 195 aa16.52■□□□□ 0.24
SMARCD2-205ENST00000577686 ERICH2A1L162 156 aa16.51■□□□□ 0.23
SMARCD2-205ENST00000577686 CKBP12277 381 aa16.51■□□□□ 0.23
SMARCD2-205ENST00000577686 BMP1P13497 986 aa16.51■□□□□ 0.23
SMARCD2-205ENST00000577686 KIAA0753Q2KHM9 967 aa16.51■□□□□ 0.23
SMARCD2-205ENST00000577686 RAD9AQ99638 391 aa16.51■□□□□ 0.23
SMARCD2-205ENST00000577686 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
SMARCD2-205ENST00000577686 ZSWIM5Q9P217 1185 aa16.51■□□□□ 0.23
SMARCD2-205ENST00000577686 HDAC6Q9UBN7 1215 aa16.51■□□□□ 0.23
SMARCD2-205ENST00000577686 LAMA4Q16363 1823 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 CDH23Q9H251 3354 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 EYSQ5T1H1 3165 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 RFXAPO00287 272 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 ZBTB5O15062 677 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 PPFIA4O75335 1185 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 CXCL10P02778 98 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 TGFB3P10600 412 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 HSD17B4P51659 736 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 GRB10Q13322 594 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 PPP1R13LQ8WUF5 828 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 TBC1D5Q92609 795 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 KAT2BQ92831 832 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 SPATA33Q96N06 139 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 TGS1Q96RS0 853 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 COL20A1Q9P218 1284 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 PCDHA1Q9Y5I3 950 aa16.5■□□□□ 0.23
SMARCD2-205ENST00000577686 KLRF2D3W0D1 207 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 GJB5O95377 273 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 AMHP03971 560 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 CCND2P30279 289 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 GHRHRQ02643 423 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 NUCB1Q02818 461 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 TFF2Q03403 129 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 SART3Q15020 963 aaKnown RBP16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 GNPTABQ3T906 1256 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 PDCD2LQ9BRP1 358 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 MLXIPQ9HAP2 919 aa16.49■□□□□ 0.23
SMARCD2-205ENST00000577686 GCOM1H8Y6P7 765 aaPredicted RBP16.48■□□□□ 0.23
SMARCD2-205ENST00000577686 HAS3O00219 553 aa16.48■□□□□ 0.23
SMARCD2-205ENST00000577686 LGR5O75473 907 aa16.48■□□□□ 0.23
SMARCD2-205ENST00000577686 GGPS1O95749 300 aa16.48■□□□□ 0.23
SMARCD2-205ENST00000577686 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
SMARCD2-205ENST00000577686 ZNF286BP0CG31 522 aa16.48■□□□□ 0.23
SMARCD2-205ENST00000577686 CELF3Q5SZQ8 465 aaKnown RBP16.48■□□□□ 0.23
SMARCD2-205ENST00000577686 RUFY2Q8WXA3 655 aa16.48■□□□□ 0.23
SMARCD2-205ENST00000577686 PRUNE2Q8WUY3 3088 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 C17orf102A2RUQ5 167 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 NOP56O00567 594 aaKnown RBP16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 CAND2O75155 1236 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 STAM2O75886 525 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 GNAT1P11488 350 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 HOXD8P13378 290 aaPredicted RBP16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 KCNQ1P51787 676 aa16.47■□□□□ 0.23
SMARCD2-205ENST00000577686 STOX1Q6ZVD7 989 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms