RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 MB21D2Q8IYB1 491 aaPredicted RBP17.31■□□□□ 0.36
MKS1-205ENST00000577315 CTCFLQ8NI51 663 aaPredicted RBP17.31■□□□□ 0.36
MKS1-205ENST00000577315 IGDCC4Q8TDY8 1250 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 AFG1LQ8WV93 481 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 PIGSQ96S52 555 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 PDCD2LQ9BRP1 358 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 WNT8AQ9H1J5 351 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 ZNF576Q9H609 170 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 MSRAQ9UJ68 235 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 KAT6AQ92794 2004 aa17.31■□□□□ 0.36
MKS1-205ENST00000577315 DLL1O00548 723 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 PPP1R11O60927 126 aaPredicted RBP17.3■□□□□ 0.36
MKS1-205ENST00000577315 DDAH1O94760 285 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 FOSL2P15408 326 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 KIF5BP33176 963 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 MCM5P33992 734 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 CHST3Q7LGC8 479 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 SESTD1Q86VW0 696 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 CCDC155Q8N6L0 562 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 RETREG2Q8NC44 543 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 MYLIPQ8WY64 445 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 LZTS2Q9BRK4 669 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 KATNAL1Q9BW62 490 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 PBX4Q9BYU1 374 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 NOD1Q9Y239 953 aa17.3■□□□□ 0.36
MKS1-205ENST00000577315 TET1Q8NFU7 2136 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 CYTH3O43739 400 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 TGFB3P10600 412 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 CYP2C9P11712 490 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 MYCLP12524 364 aaPredicted RBP17.29■□□□□ 0.36
MKS1-205ENST00000577315 ACTN1P12814 892 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 GNAQP50148 359 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 ANTXR2P58335 489 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 PGM5Q15124 567 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 VSIG10LQ86VR7 867 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
MKS1-205ENST00000577315 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
MKS1-205ENST00000577315 SENP2Q9HC62 589 aa17.29■□□□□ 0.36
MKS1-205ENST00000577315 STAM2O75886 525 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 CALM1P0DP23 149 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 CALM2P0DP24 149 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 CALM3P0DP25 149 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 CCND2P30279 289 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 OTOP2Q7RTS6 562 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.28■□□□□ 0.36
MKS1-205ENST00000577315 ZNF654Q8IZM8 581 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 PPTC7Q8NI37 304 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 CAGE1Q8TC20 777 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 SCLYQ96I15 445 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 SPZ1Q9BXG8 430 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 LSG1Q9H089 658 aaKnown RBP17.28■□□□□ 0.36
MKS1-205ENST00000577315 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 TAF6LQ9Y6J9 622 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 SLC4A7Q9Y6M7 1214 aa17.28■□□□□ 0.36
MKS1-205ENST00000577315 CCDC69A6NI79 296 aa17.27■□□□□ 0.36
MKS1-205ENST00000577315 PRC1O43663 620 aa17.27■□□□□ 0.36
MKS1-205ENST00000577315 PARNO95453 639 aaKnown RBP17.27■□□□□ 0.36
MKS1-205ENST00000577315 HOXA13P31271 388 aaPredicted RBP17.27■□□□□ 0.36
MKS1-205ENST00000577315 LIFRP42702 1097 aa17.27■□□□□ 0.36
MKS1-205ENST00000577315 PTGISQ16647 500 aa17.27■□□□□ 0.36
MKS1-205ENST00000577315 SLC35G1Q2M3R5 365 aa17.27■□□□□ 0.36
MKS1-205ENST00000577315 CENPQQ7L2Z9 268 aaPredicted RBP17.27■□□□□ 0.36
MKS1-205ENST00000577315 RRP36Q96EU6 259 aaKnown RBP17.27■□□□□ 0.36
MKS1-205ENST00000577315 CXXC1Q9P0U4 656 aaPredicted RBP17.27■□□□□ 0.36
MKS1-205ENST00000577315 SEC63Q9UGP8 760 aaKnown RBP17.27■□□□□ 0.36
MKS1-205ENST00000577315 GRXCR1A8MXD5 290 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 PPFIA4O75335 1185 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 IQCF3P0C7M6 154 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 CHMP4BP1P59074 171 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 GRIN2CQ14957 1233 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 GNPTABQ3T906 1256 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 RNF20Q5VTR2 975 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 NFXL1Q6ZNB6 911 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 FCHSD1Q86WN1 690 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 AFAP1L1Q8TED9 768 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 KAT2BQ92831 832 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 CUL5Q93034 780 aa17.26■□□□□ 0.35
MKS1-205ENST00000577315 GAS2L1Q99501 681 aaPredicted RBP17.26■□□□□ 0.35
MKS1-205ENST00000577315 DOCK5Q9H7D0 1870 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 ZBBXA8MT70 800 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
MKS1-205ENST00000577315 SLC27A2O14975 620 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 RGS20O76081 388 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 HOXD8P13378 290 aaPredicted RBP17.25■□□□□ 0.35
MKS1-205ENST00000577315 PBX2P40425 430 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 PSEN2P49810 448 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 NECTIN1Q15223 517 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 CELF3Q5SZQ8 465 aaKnown RBP17.25■□□□□ 0.35
MKS1-205ENST00000577315 MYSM1Q5VVJ2 828 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 C7orf31Q8N865 590 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 SLC28A3Q9HAS3 691 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 ANO2Q9NQ90 1003 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 GTF2IRD1Q9UHL9 959 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 PCDHA11Q9Y5I1 949 aa17.25■□□□□ 0.35
MKS1-205ENST00000577315 FRMPD4Q14CM0 1322 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 HAS3O00219 553 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 GGPS1O95749 300 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms