RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 CCDC62Q6P9F0 684 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 PHOSPHO2Q8TCD6 241 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 AFAP1L1Q8TED9 768 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 PPP1R13LQ8WUF5 828 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 MRVI1Q9Y6F6 885 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 TNFRSF10AO00220 468 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 EIF3JO75822 258 aaKnown RBP14.18□□□□□ -0.14
CCDC40-210ENST00000573903 BAIAP3O94812 1187 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 PARNO95453 639 aaKnown RBP14.18□□□□□ -0.14
CCDC40-210ENST00000573903 CA3P07451 260 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 MYOGP15173 224 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 ARHGAP1Q07960 439 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 TRAF1Q13077 416 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 TBC1D5Q92609 795 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 ASB2Q96Q27 587 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 JMJD4Q9H9V9 463 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 PXMP2Q9NR77 195 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 COL20A1Q9P218 1284 aa14.18□□□□□ -0.14
CCDC40-210ENST00000573903 TRIP12Q14669 1992 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-210ENST00000573903 ERICH2A1L162 156 aa14.17□□□□□ -0.14
CCDC40-210ENST00000573903 KLRF2D3W0D1 207 aa14.17□□□□□ -0.14
CCDC40-210ENST00000573903 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-210ENST00000573903 LAMC2Q13753 1193 aa14.17□□□□□ -0.14
CCDC40-210ENST00000573903 SKIV2LQ15477 1246 aaKnown RBP14.17□□□□□ -0.14
CCDC40-210ENST00000573903 SESTD1Q86VW0 696 aa14.17□□□□□ -0.14
CCDC40-210ENST00000573903 DHX37Q8IY37 1157 aaKnown RBP14.17□□□□□ -0.14
CCDC40-210ENST00000573903 C7orf31Q8N865 590 aa14.17□□□□□ -0.14
CCDC40-210ENST00000573903 VWCEQ96DN2 955 aa14.17□□□□□ -0.14
CCDC40-210ENST00000573903 MAP3K20Q9NYL2 800 aaKnown RBP14.17□□□□□ -0.14
CCDC40-210ENST00000573903 MYH7BA7E2Y1 1941 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 ZBTB5O15062 677 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 NEFLP07196 543 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 NR3C2P08235 984 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 MYCLP12524 364 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-210ENST00000573903 SELPP16109 830 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 AAK1Q2M2I8 961 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 GDF6Q6KF10 455 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-210ENST00000573903 KCNV1Q6PIU1 500 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 LRRC8DQ7L1W4 858 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 HERC6Q8IVU3 1022 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 ADAMTS19Q8TE59 1207 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 RUFY2Q8WXA3 655 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 EMID1Q96A84 441 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-210ENST00000573903 GTF2IRD1Q9UHL9 959 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 DDX41Q9UJV9 622 aaKnown RBP14.16□□□□□ -0.14
CCDC40-210ENST00000573903 VCANP13611 3396 aa14.16□□□□□ -0.14
CCDC40-210ENST00000573903 TLL1O43897 1013 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 PSEN2P49810 448 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 HSD17B4P51659 736 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
CCDC40-210ENST00000573903 RALYLQ86SE5 291 aaKnown RBP14.15□□□□□ -0.14
CCDC40-210ENST00000573903 HOMER1Q86YM7 354 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 STAG2Q8N3U4 1231 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 SAMD3Q8N6K7 520 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 PPTC7Q8NI37 304 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 ALG1Q9BT22 464 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 PCDHA1Q9Y5I3 950 aa14.15□□□□□ -0.14
CCDC40-210ENST00000573903 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-210ENST00000573903 F2P00734 622 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 ZNF286BP0CG31 522 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 MFSD10Q14728 455 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 SEC23AQ15436 765 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 KIAA0753Q2KHM9 967 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 CNKSR3Q6P9H4 555 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 ARNTL2Q8WYA1 636 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 KAT2BQ92831 832 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 UHRF1Q96T88 793 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-210ENST00000573903 PDCD2LQ9BRP1 358 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 CERS4Q9HA82 394 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 HDAC6Q9UBN7 1215 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 MAD2L2Q9UI95 211 aa14.14□□□□□ -0.15
CCDC40-210ENST00000573903 GCOM1H8Y6P7 765 aaPredicted RBP14.13□□□□□ -0.15
CCDC40-210ENST00000573903 IFIT3O14879 490 aaKnown RBP14.13□□□□□ -0.15
CCDC40-210ENST00000573903 EFCAB14O75071 495 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 POLR2MP0CAP2 368 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 CCND2P30279 289 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 WDR5P61964 334 aaKnown RBP14.13□□□□□ -0.15
CCDC40-210ENST00000573903 GHRHRQ02643 423 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 RBL2Q08999 1139 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 PTK7Q13308 1070 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 PGM5Q15124 567 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 TTC22Q5TAA0 569 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 CYB5R4Q7L1T6 521 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 TET1Q8NFU7 2136 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 SPATA33Q96N06 139 aa14.13□□□□□ -0.15
CCDC40-210ENST00000573903 PTPRSQ13332 1948 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 COL4A4P53420 1690 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-210ENST00000573903 PALM3A6NDB9 673 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-210ENST00000573903 RFXAPO00287 272 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 OPLAHO14841 1288 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 PPFIA4O75335 1185 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 GGPS1O95749 300 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 TGFB3P10600 412 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 CKBP12277 381 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 HOXA13P31271 388 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-210ENST00000573903 TAP1Q03518 808 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 GRM4Q14833 912 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 WTAPQ15007 396 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms