RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 FBXO46Q6PJ61 603 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 MAMDC4Q6UXC1 1216 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 SEPT14Q6ZU15 432 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 BRAPQ7Z569 592 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 NEK8Q86SG6 692 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 NLRX1Q86UT6 975 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 VSIG10LQ86VR7 867 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 FBXO16Q8IX29 292 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 TNFRSF25Q93038 417 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 NAP1L4Q99733 375 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 ABHD16BQ9H3Z7 469 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 FRMPD4Q14CM0 1322 aa10.75□□□□□ -0.69
NPLOC4-208ENST00000572351 FAM205CA6NFA0 338 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 MARCH6O60337 910 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 CCNT1O60563 726 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 SNAI1O95863 264 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 INHAP05111 366 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 ZSCAN22P10073 491 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 EDNRBP24530 442 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 U2AF2P26368 475 aaKnown RBP eCLIP10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 CNGA1P29973 690 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 USP11P51784 963 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 NUCB2P80303 420 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 ACVR2BQ13705 512 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 CEP55Q53EZ4 464 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 EARS2Q5JPH6 523 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 SH3TC2Q8TF17 1288 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 ZSCAN16Q9H4T2 348 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 VTA1Q9NP79 307 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 NRBP1Q9UHY1 535 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 MRVI1Q9Y6F6 885 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 PARP14Q460N5 1801 aa10.74□□□□□ -0.69
NPLOC4-208ENST00000572351 F13A1P00488 732 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 MYCP01106 439 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 CYP3A4P08684 503 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 TRAPPC10P48553 1259 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 MRPS9P82933 396 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 SETQ01105 290 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 MTMR1Q13613 665 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 PKP1Q13835 747 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 PRR16Q569H4 304 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 RILPL1Q5EBL4 403 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 TTC38Q5R3I4 469 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 PRAMEF19Q5SWL8 479 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 MORC4Q8TE76 937 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 SCFD2Q8WU76 684 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 CDHR1Q96JP9 859 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 MXRA8Q9BRK3 442 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 JADE2Q9NQC1 790 aa10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 DDX25Q9UHL0 483 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-208ENST00000572351 FAM86B1E9PN63 330 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 FIBPO43427 364 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 TDP2O95551 362 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 BRD1O95696 1058 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 FAM86B2P0C5J1 330 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 GCFC2P16383 781 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 ITGB5P18084 799 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 CACNB2Q08289 660 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 TRIM32Q13049 653 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 RESTQ13127 1097 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 TTLL4Q14679 1199 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 FOXD4L6Q3SYB3 417 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 MYSM1Q5VVJ2 828 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 KCNV1Q6PIU1 500 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 FOXD4L3Q6VB84 417 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 PLA2G4DQ86XP0 818 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 CRYGNQ8WXF5 182 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 GPRASP2Q96D09 838 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 WDR11Q9BZH6 1224 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 PKD2L1Q9P0L9 805 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 ATP6V1DQ9Y5K8 247 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 UBIAD1Q9Y5Z9 338 aa10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-208ENST00000572351 NEMFO60524 1076 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 ZNF865P0CJ78 1059 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 TXNP10599 105 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 CYBAP13498 195 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 AKR1A1P14550 325 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 CIITAP33076 1130 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 MCM7P33993 719 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 ADCYAP1R1P41586 468 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 ZNF174Q15697 407 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 CCDC144BQ3MJ40 725 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 PPP4R3AQ6IN85 833 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 MOXD1Q6UVY6 613 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 CYP2W1Q8TAV3 490 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 ZNF396Q96N95 335 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 INPP4AQ96PE3 977 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 ZNF577Q9BSK1 485 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 MCOLN1Q9GZU1 580 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 HMX1Q9NP08 348 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 PDGFCQ9NRA1 345 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 KCNH7Q9NS40 1196 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 CHMP5Q9NZZ3 219 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 TCEAL9Q9UHQ7 104 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 ZNF236Q9UL36 1845 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 FAM184BQ9ULE4 1060 aa10.71□□□□□ -0.69
NPLOC4-208ENST00000572351 CYP3A7-CYP3A51PA0A087WV96 503 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms