RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 SCFD2Q8WU76 684 aa21.98■■□□□ 1.11
NME3-207ENST00000564628 TMEM87BQ96K49 555 aa21.98■■□□□ 1.11
NME3-207ENST00000564628 A6NJR5 290 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 PITPNM1O00562 1244 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 ACTN1P12814 892 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 MYOGP15173 224 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 CALML3P27482 149 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 PTPN11Q06124 597 aaPredicted RBP21.97■■□□□ 1.11
NME3-207ENST00000564628 PDE4DQ08499 809 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 KRT32Q14532 448 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 TTLL4Q14679 1199 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 GRM4Q14833 912 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 PPP2R5BQ15173 497 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 ADCK5Q3MIX3 580 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 NEK1Q96PY6 1258 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 CPVLQ9H3G5 476 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 SCN10AQ9Y5Y9 1956 aa21.97■■□□□ 1.11
NME3-207ENST00000564628 PALM3A6NDB9 673 aaPredicted RBP21.96■■□□□ 1.11
NME3-207ENST00000564628 B4DLN1 442 aa21.96■■□□□ 1.11
NME3-207ENST00000564628 LIFRP42702 1097 aa21.96■■□□□ 1.11
NME3-207ENST00000564628 MRPL12P52815 198 aaKnown RBP21.96■■□□□ 1.11
NME3-207ENST00000564628 RPS6P62753 249 aaKnown RBP21.96■■□□□ 1.11
NME3-207ENST00000564628 EXOSC10Q01780 885 aaKnown RBP21.96■■□□□ 1.11
NME3-207ENST00000564628 NBPF20Q3BBV1 942 aa21.96■■□□□ 1.11
NME3-207ENST00000564628 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
NME3-207ENST00000564628 UBA5Q9GZZ9 404 aa21.96■■□□□ 1.11
NME3-207ENST00000564628 MAD2L2Q9UI95 211 aa21.96■■□□□ 1.11
NME3-207ENST00000564628 BAZ2BQ9UIF8 2168 aaKnown RBP21.95■■□□□ 1.1
NME3-207ENST00000564628 POU3F3P20264 500 aaPredicted RBP21.95■■□□□ 1.1
NME3-207ENST00000564628 DEFB128Q7Z7B8 93 aa21.95■■□□□ 1.1
NME3-207ENST00000564628 STAG2Q8N3U4 1231 aa21.95■■□□□ 1.1
NME3-207ENST00000564628 RGS22Q8NE09 1264 aa21.95■■□□□ 1.1
NME3-207ENST00000564628 PHOSPHO2Q8TCD6 241 aa21.95■■□□□ 1.1
NME3-207ENST00000564628 SLC9A7Q96T83 725 aa21.95■■□□□ 1.1
NME3-207ENST00000564628 UHRF1Q96T88 793 aaPredicted RBP21.95■■□□□ 1.1
NME3-207ENST00000564628 MAF1Q9H063 256 aa21.95■■□□□ 1.1
NME3-207ENST00000564628 SNX14Q9Y5W7 946 aa21.95■■□□□ 1.1
NME3-207ENST00000564628 FAM47CQ5HY64 1035 aa21.94■■□□□ 1.1
NME3-207ENST00000564628 DHX32Q7L7V1 743 aaKnown RBP21.94■■□□□ 1.1
NME3-207ENST00000564628 ADGRF4Q8IZF3 695 aa21.94■■□□□ 1.1
NME3-207ENST00000564628 ZNF654Q8IZM8 581 aa21.94■■□□□ 1.1
NME3-207ENST00000564628 MAP3K14Q99558 947 aa21.94■■□□□ 1.1
NME3-207ENST00000564628 USP26Q9BXU7 913 aa21.94■■□□□ 1.1
NME3-207ENST00000564628 DDAH1O94760 285 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 IQCF3P0C7M6 154 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 TXNP10599 105 aaKnown RBP21.93■■□□□ 1.1
NME3-207ENST00000564628 COL9A1P20849 921 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 SLC35G1Q2M3R5 365 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 CATIPQ7Z7H3 387 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 SGMS1Q86VZ5 419 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 TMTC2Q8N394 836 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 RETREG2Q8NC44 543 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 MTMR8Q96EF0 704 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 TANC1Q9C0D5 1861 aa21.93■■□□□ 1.1
NME3-207ENST00000564628 KLRF2D3W0D1 207 aa21.92■■□□□ 1.1
NME3-207ENST00000564628 CA3P07451 260 aa21.92■■□□□ 1.1
NME3-207ENST00000564628 HMGB1P09429 215 aaKnown RBP21.92■■□□□ 1.1
NME3-207ENST00000564628 BFSP2Q13515 415 aa21.92■■□□□ 1.1
NME3-207ENST00000564628 CDC37Q16543 378 aaPredicted RBP21.92■■□□□ 1.1
NME3-207ENST00000564628 AAK1Q2M2I8 961 aa21.92■■□□□ 1.1
NME3-207ENST00000564628 LRRC2Q9BYS8 371 aa21.92■■□□□ 1.1
NME3-207ENST00000564628 JMJD4Q9H9V9 463 aa21.92■■□□□ 1.1
NME3-207ENST00000564628 SCN5AQ14524 2016 aa21.92■■□□□ 1.1
NME3-207ENST00000564628 TRANK1O15050 2925 aa21.91■■□□□ 1.1
NME3-207ENST00000564628 COPS5Q92905 334 aa21.91■■□□□ 1.1
NME3-207ENST00000564628 BDP1A6H8Y1 2624 aa21.91■■□□□ 1.1
NME3-207ENST00000564628 NCOR1O75376 2440 aa21.9■■□□□ 1.1
NME3-207ENST00000564628 GTPBP6O43824 516 aaPredicted RBP21.9■■□□□ 1.1
NME3-207ENST00000564628 BAIAP3O94812 1187 aa21.9■■□□□ 1.1
NME3-207ENST00000564628 BMP1P13497 986 aa21.9■■□□□ 1.1
NME3-207ENST00000564628 QRICH1Q2TAL8 776 aa21.9■■□□□ 1.1
NME3-207ENST00000564628 MICALL1Q8N3F8 863 aa21.9■■□□□ 1.1
NME3-207ENST00000564628 JAKMIP1Q96N16 626 aaKnown RBP21.9■■□□□ 1.1
NME3-207ENST00000564628 RIOX1Q9H6W3 641 aa21.9■■□□□ 1.1
NME3-207ENST00000564628 NOD1Q9Y239 953 aa21.9■■□□□ 1.1
NME3-207ENST00000564628 MTCH2Q9Y6C9 303 aa21.9■■□□□ 1.1
NME3-207ENST00000564628 CCDC69A6NI79 296 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 ARIH2O95376 493 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 CCDC62Q6P9F0 684 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 SESTD1Q86VW0 696 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 HERC6Q8IVU3 1022 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 CCDC155Q8N6L0 562 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 CAGE1Q8TC20 777 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 TCEANC2Q96MN5 208 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 MYL10Q9BUA6 226 aa21.89■■□□□ 1.09
NME3-207ENST00000564628 FTOQ9C0B1 505 aaKnown RBP eCLIP21.89■■□□□ 1.09
NME3-207ENST00000564628 KIF28PB7ZC32 967 aa21.88■■□□□ 1.09
NME3-207ENST00000564628 CYTH3O43739 400 aa21.88■■□□□ 1.09
NME3-207ENST00000564628 TAP1Q03518 808 aa21.88■■□□□ 1.09
NME3-207ENST00000564628 USH1GQ495M9 461 aa21.88■■□□□ 1.09
NME3-207ENST00000564628 NFXL1Q6ZNB6 911 aa21.88■■□□□ 1.09
NME3-207ENST00000564628 FBXL16Q8N461 479 aa21.88■■□□□ 1.09
NME3-207ENST00000564628 AFAP1L1Q8TED9 768 aa21.88■■□□□ 1.09
NME3-207ENST00000564628 REV3LO60673 3130 aa21.87■■□□□ 1.09
NME3-207ENST00000564628 ABCB11O95342 1321 aa21.87■■□□□ 1.09
NME3-207ENST00000564628 CALM1P0DP23 149 aa21.87■■□□□ 1.09
NME3-207ENST00000564628 CALM2P0DP24 149 aa21.87■■□□□ 1.09
NME3-207ENST00000564628 CALM3P0DP25 149 aa21.87■■□□□ 1.09
NME3-207ENST00000564628 SMARCA1P28370 1054 aa21.87■■□□□ 1.09
NME3-207ENST00000564628 KIF5BP33176 963 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms