RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 USH1GQ495M9 461 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 DEFB128Q7Z7B8 93 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 MICALL1Q8N3F8 863 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
TPM1-227ENST00000560970 ZSWIM5Q9P217 1185 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 NOD1Q9Y239 953 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 ABCB11O95342 1321 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 BAIAP3O94812 1187 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 CA3P07451 260 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 TXNP10599 105 aaKnown RBP12.5□□□□□ -0.41
TPM1-227ENST00000560970 BFSP2Q13515 415 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 NECTIN1Q15223 517 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 TMEM67Q5HYA8 995 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 CREB3L3Q68CJ9 461 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 CCDC155Q8N6L0 562 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 ENAHQ8N8S7 591 aaPredicted RBP12.5□□□□□ -0.41
TPM1-227ENST00000560970 COPS5Q92905 334 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 UHRF1Q96T88 793 aaPredicted RBP12.5□□□□□ -0.41
TPM1-227ENST00000560970 KRT23Q9C075 422 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 MAF1Q9H063 256 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 COL4A6Q14031 1691 aa12.5□□□□□ -0.41
TPM1-227ENST00000560970 ARIH2O95376 493 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 MMP3P08254 477 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 ANTXR2P58335 489 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 SEC23AQ15436 765 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 CASC1Q6TDU7 716 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 IQCA1Q86XH1 822 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 MB21D2Q8IYB1 491 aaPredicted RBP12.49□□□□□ -0.41
TPM1-227ENST00000560970 PNMA1Q8ND90 353 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 CAGE1Q8TC20 777 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
TPM1-227ENST00000560970 SENP2Q9HC62 589 aa12.49□□□□□ -0.41
TPM1-227ENST00000560970 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
TPM1-227ENST00000560970 GH1P01241 217 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 CHST3Q7LGC8 479 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 SESTD1Q86VW0 696 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 DGKHQ86XP1 1220 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 RETREG2Q8NC44 543 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 PHOSPHO2Q8TCD6 241 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 AFAP1L1Q8TED9 768 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 PPP1R13LQ8WUF5 828 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 ANKS1AQ92625 1134 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 KAT14Q9H8E8 782 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 KAT6AQ92794 2004 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 KIAA1671Q9BY89 1806 aa12.48□□□□□ -0.41
TPM1-227ENST00000560970 KCNJ6P48051 423 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 ARHGAP1Q07960 439 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 PTGISQ16647 500 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 AAK1Q2M2I8 961 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 CCDC178Q5BJE1 867 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 RALYLQ86SE5 291 aaKnown RBP12.47□□□□□ -0.41
TPM1-227ENST00000560970 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 NSUN6Q8TEA1 469 aaKnown RBP12.47□□□□□ -0.41
TPM1-227ENST00000560970 AFG1LQ8WV93 481 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 FTOQ9C0B1 505 aaKnown RBP eCLIP12.47□□□□□ -0.41
TPM1-227ENST00000560970 COL20A1Q9P218 1284 aa12.47□□□□□ -0.41
TPM1-227ENST00000560970 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
TPM1-227ENST00000560970 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 POU3F3P20264 500 aaPredicted RBP12.46□□□□□ -0.41
TPM1-227ENST00000560970 CHMP4BP1P59074 171 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 TAP1Q03518 808 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 RBL2Q08999 1139 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 TRDNQ13061 729 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 SKIV2LQ15477 1246 aaKnown RBP12.46□□□□□ -0.41
TPM1-227ENST00000560970 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 GDF6Q6KF10 455 aaPredicted RBP12.46□□□□□ -0.41
TPM1-227ENST00000560970 SEPT14Q6ZU15 432 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 LRRC8DQ7L1W4 858 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 MCF2L2Q86YR7 1114 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 ADGRF4Q8IZF3 695 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 SYTL5Q8TDW5 730 aaPredicted RBP12.46□□□□□ -0.41
TPM1-227ENST00000560970 EMID1Q96A84 441 aaPredicted RBP12.46□□□□□ -0.41
TPM1-227ENST00000560970 IWS1Q96ST2 819 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 RMDN3Q96TC7 470 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 KATNAL1Q9BW62 490 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 MTCH2Q9Y6C9 303 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 BRWD1Q9NSI6 2320 aa12.46□□□□□ -0.41
TPM1-227ENST00000560970 BAZ2BQ9UIF8 2168 aaKnown RBP12.46□□□□□ -0.42
TPM1-227ENST00000560970 EPOPA6NHQ4 379 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 ARHGEF15O94989 841 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 PARNO95453 639 aaKnown RBP12.45□□□□□ -0.42
TPM1-227ENST00000560970 F2P00734 622 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
TPM1-227ENST00000560970 SELPP16109 830 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 COL9A1P20849 921 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 WDR5P61964 334 aaKnown RBP12.45□□□□□ -0.42
TPM1-227ENST00000560970 TFF2Q03403 129 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 STXBP2Q15833 593 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms