RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 TROAPQ12815 778 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 LAMC2Q13753 1193 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 GRIN2CQ14957 1233 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 STOX1Q6ZVD7 989 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 CHST3Q7LGC8 479 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 MAP4K1Q92918 833 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 SCLYQ96I15 445 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 PDCD2LQ9BRP1 358 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
SPG11-219ENST00000559822 CXXC1Q9P0U4 656 aaPredicted RBP14.22□□□□□ -0.13
SPG11-219ENST00000559822 DDX41Q9UJV9 622 aaKnown RBP14.22□□□□□ -0.13
SPG11-219ENST00000559822 PNMA6FA0A0J9YX94 578 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 GRXCR1A8MXD5 290 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 OPLAHO14841 1288 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 PPP1R11O60927 126 aaPredicted RBP14.21□□□□□ -0.13
SPG11-219ENST00000559822 MYCLP12524 364 aaPredicted RBP14.21□□□□□ -0.13
SPG11-219ENST00000559822 KIF5BP33176 963 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 PBX2P40425 430 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 CHMP4BP1P59074 171 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 PTGISQ16647 500 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 CASC1Q6TDU7 716 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 SESTD1Q86VW0 696 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 CTCFLQ8NI51 663 aaPredicted RBP14.21□□□□□ -0.13
SPG11-219ENST00000559822 CAGE1Q8TC20 777 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 PIGSQ96S52 555 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 MAP3K14Q99558 947 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 SLC28A3Q9HAS3 691 aa14.21□□□□□ -0.13
SPG11-219ENST00000559822 RBM8AQ9Y5S9 174 aaKnown RBP14.21□□□□□ -0.13
SPG11-219ENST00000559822 DDAH1O94760 285 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 TGFB3P10600 412 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 CCND2P30279 289 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 PGM5Q15124 567 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 VSIG10LQ86VR7 867 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 DHX37Q8IY37 1157 aaKnown RBP14.2□□□□□ -0.14
SPG11-219ENST00000559822 MB21D2Q8IYB1 491 aaPredicted RBP14.2□□□□□ -0.14
SPG11-219ENST00000559822 TMTC2Q8N394 836 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 PPTC7Q8NI37 304 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 AFAP1L1Q8TED9 768 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 LZTS2Q9BRK4 669 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 CUL9Q8IWT3 2517 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 TANC1Q9C0D5 1861 aa14.2□□□□□ -0.14
SPG11-219ENST00000559822 STAM2O75886 525 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 PARNO95453 639 aaKnown RBP14.19□□□□□ -0.14
SPG11-219ENST00000559822 IQCF3P0C7M6 154 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 ATP2A2P16615 1042 aaKnown RBP14.19□□□□□ -0.14
SPG11-219ENST00000559822 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
SPG11-219ENST00000559822 MCM5P33992 734 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 GNPTABQ3T906 1256 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 DEFB128Q7Z7B8 93 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 ZNF654Q8IZM8 581 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 C7orf31Q8N865 590 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 IGDCC4Q8TDY8 1250 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 SLC9A7Q96T83 725 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 NKX2-4Q9H2Z4 354 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 PCDHA11Q9Y5I1 949 aa14.19□□□□□ -0.14
SPG11-219ENST00000559822 CYTH3O43739 400 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 PPFIA4O75335 1185 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 F2P00734 622 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 SMARCA1P28370 1054 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 PSEN2P49810 448 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 GNAQP50148 359 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 ANTXR2P58335 489 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 NFXL1Q6ZNB6 911 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 FCHSD1Q86WN1 690 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 KAT2BQ92831 832 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 RRP36Q96EU6 259 aaKnown RBP14.18□□□□□ -0.14
SPG11-219ENST00000559822 TMEM87BQ96K49 555 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 SPZ1Q9BXG8 430 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 FTOQ9C0B1 505 aaKnown RBP eCLIP14.18□□□□□ -0.14
SPG11-219ENST00000559822 SENP2Q9HC62 589 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 SEC63Q9UGP8 760 aaKnown RBP14.18□□□□□ -0.14
SPG11-219ENST00000559822 GTF2IRD1Q9UHL9 959 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 TAF6LQ9Y6J9 622 aa14.18□□□□□ -0.14
SPG11-219ENST00000559822 CCDC69A6NI79 296 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 PRC1O43663 620 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 BAIAP3O94812 1187 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 GGPS1O95749 300 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 CALM1P0DP23 149 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 CALM2P0DP24 149 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 CALM3P0DP25 149 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 HOXD8P13378 290 aaPredicted RBP14.17□□□□□ -0.14
SPG11-219ENST00000559822 SELPP16109 830 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 MFSD10Q14728 455 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 SLC35G1Q2M3R5 365 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 CELF3Q5SZQ8 465 aaKnown RBP14.17□□□□□ -0.14
SPG11-219ENST00000559822 MYSM1Q5VVJ2 828 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 PPP2R2DQ66LE6 453 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
SPG11-219ENST00000559822 PHOSPHO2Q8TCD6 241 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 PPP1R13LQ8WUF5 828 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 SYMPKQ92797 1274 aaKnown RBP14.17□□□□□ -0.14
SPG11-219ENST00000559822 CUL5Q93034 780 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 VWCEQ96DN2 955 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 SPATA33Q96N06 139 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 COL25A1Q9BXS0 654 aaPredicted RBP14.17□□□□□ -0.14
SPG11-219ENST00000559822 PRDM12Q9H4Q4 367 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 LY9Q9HBG7 655 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 YBX2Q9Y2T7 364 aaKnown RBP14.17□□□□□ -0.14
SPG11-219ENST00000559822 CDH23Q9H251 3354 aa14.17□□□□□ -0.14
SPG11-219ENST00000559822 KIF28PB7ZC32 967 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms