RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 NR3C2P08235 984 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 ZNF865P0CJ78 1059 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-206ENST00000555046 EDNRBP24530 442 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 CCND3P30281 292 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-206ENST00000555046 HOXA13P31271 388 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-206ENST00000555046 ADCY7P51828 1080 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 SCRN1Q12765 414 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-206ENST00000555046 PRAMEF19Q5SWL8 479 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 WWC2Q6AWC2 1192 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 RNF180Q86T96 592 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 VSIG10LQ86VR7 867 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 PHKBQ93100 1093 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 KIF2CQ99661 725 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 PXMP2Q9NR77 195 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 OGDHLQ9ULD0 1010 aa12.15□□□□□ -0.46
TMEM260-206ENST00000555046 STXBP3O00186 592 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 MEIS2O14770 477 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 OPLAHO14841 1288 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 ZEB2O60315 1214 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 TGFB3P10600 412 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-206ENST00000555046 CCND2P30279 289 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 NLRP5P59047 1200 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 TNFAIP2Q03169 654 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 AP3B2Q13367 1082 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 TTLL4Q14679 1199 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 ME3Q16798 604 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 CCDC144BQ3MJ40 725 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 LHX8Q68G74 356 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
TMEM260-206ENST00000555046 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 FGD4Q96M96 766 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
TMEM260-206ENST00000555046 ZMYND8Q9ULU4 1186 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-206ENST00000555046 MAFGO15525 162 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 EIF2AK2P19525 551 aaKnown RBP12.13□□□□□ -0.47
TMEM260-206ENST00000555046 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
TMEM260-206ENST00000555046 HMGN5P82970 282 aaKnown RBP12.13□□□□□ -0.47
TMEM260-206ENST00000555046 PKN1Q16512 942 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 GNPTABQ3T906 1256 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 TJAP1Q5JTD0 557 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 USP17L6PQ6QN14 398 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 NECAB2Q7Z6G3 386 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 PCSK9Q8NBP7 692 aaKnown RBP12.13□□□□□ -0.47
TMEM260-206ENST00000555046 TRPV1Q8NER1 839 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
TMEM260-206ENST00000555046 PDCD2LQ9BRP1 358 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 XPNPEP3Q9NQH7 507 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 ORC3Q9UBD5 711 aaPredicted RBP12.13□□□□□ -0.47
TMEM260-206ENST00000555046 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
TMEM260-206ENST00000555046 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
TMEM260-206ENST00000555046 STK36Q9NRP7 1315 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 RBM47A0AV96 593 aaKnown RBP12.12□□□□□ -0.47
TMEM260-206ENST00000555046 KBTBD13C9JR72 458 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 DNM1LO00429 736 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 MYCLP12524 364 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-206ENST00000555046 TRIM29Q14134 588 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 PGM5Q15124 567 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 DUSP28Q4G0W2 176 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 PCNX4Q63HM2 1172 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 TAPT1Q6NXT6 567 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 NLRX1Q86UT6 975 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 NECAB1Q8N987 351 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 TSEN34Q9BSV6 310 aaKnown RBP12.12□□□□□ -0.47
TMEM260-206ENST00000555046 BRMS1Q9HCU9 246 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 COL20A1Q9P218 1284 aa12.12□□□□□ -0.47
TMEM260-206ENST00000555046 DOCK3Q8IZD9 2030 aa12.11□□□□□ -0.47
TMEM260-206ENST00000555046 KPNA6O60684 536 aa12.11□□□□□ -0.47
TMEM260-206ENST00000555046 TXNP10599 105 aaKnown RBP12.11□□□□□ -0.47
TMEM260-206ENST00000555046 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
TMEM260-206ENST00000555046 C7orf61Q8IZ16 206 aa12.11□□□□□ -0.47
TMEM260-206ENST00000555046 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
TMEM260-206ENST00000555046 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
TMEM260-206ENST00000555046 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-206ENST00000555046 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-206ENST00000555046 KATNBL1Q9H079 304 aa12.11□□□□□ -0.47
TMEM260-206ENST00000555046 ASTN1O14525 1302 aa12.11□□□□□ -0.47
TMEM260-206ENST00000555046 DYNC1LI2O43237 492 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-206ENST00000555046 CABYRO75952 493 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-206ENST00000555046 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 CPT1AP50416 773 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 GJA9P57773 515 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 NKX3-2P78367 333 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 LAMC2Q13753 1193 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 FBXO16Q8IX29 292 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-206ENST00000555046 ALG1Q9BT22 464 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 SEZ6LQ9BYH1 1024 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 PCDHA4Q9UN74 947 aa12.1□□□□□ -0.47
TMEM260-206ENST00000555046 GNEQ9Y223 722 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms