RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
ATP2B1-207ENST00000550716 SMCHD1A6NHR9 2005 aa10.38□□□□□ -0.75
ATP2B1-207ENST00000550716 ASTN1O14525 1302 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 ATP2A1O14983 1001 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 CTAGE5O15320 804 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 RAG1P15918 1043 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 COPB2P35606 906 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 RAB15P59190 212 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 SNAP25P60880 206 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 ACVR2BQ13705 512 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 INTS6LQ5JSJ4 861 aaKnown RBP10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 C16orf59Q7L2K0 433 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 ANKRD33Q7Z3H0 272 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 PRPF38AQ8NAV1 312 aaKnown RBP10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 USP38Q8NB14 1042 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 PI4K2BQ8TCG2 481 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 MKL1Q969V6 931 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 DDX11Q96FC9 970 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 SENP2Q9HC62 589 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 INCENPQ9NQS7 918 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 STARD7Q9NQZ5 370 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 PLXNA1Q9UIW2 1896 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 TBX21Q9UL17 535 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 FAM184BQ9ULE4 1060 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 PCDHB9Q9Y5E1 797 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 PLIN4Q96Q06 1357 aa10.37□□□□□ -0.75
ATP2B1-207ENST00000550716 ZNF536O15090 1300 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 ZBED4O75132 1171 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 DUSP11O75319 330 aaKnown RBP10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 C6orf222P0C671 652 aaPredicted RBP10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 FPGSQ05932 587 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 GRIN2CQ14957 1233 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 CCDC144BQ3MJ40 725 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 TMEM63BQ5T3F8 832 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 PPP1R26Q5T8A7 1209 aaPredicted RBP10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 SLFN13Q68D06 897 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 CCDC129Q6ZRS4 1044 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 ARMCX2Q7L311 632 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 IFNL3Q8IZI9 196 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 MSL3Q8N5Y2 521 aaKnown RBP10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 GMCL1P1Q8NEA9 526 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 AGBL1Q96MI9 1066 aa10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 TSEN34Q9BSV6 310 aaKnown RBP10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 UPF3AQ9H1J1 476 aaKnown RBP10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 ZNFX1Q9P2E3 1918 aaKnown RBP10.36□□□□□ -0.75
ATP2B1-207ENST00000550716 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 TMEM232C9JQI7 657 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 NMT2O60551 498 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 TTLL1O95922 423 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 APPP05067 770 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 ASGR1P07306 291 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 FOSL2P15408 326 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 CST5P28325 142 aaPredicted RBP10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 CDK7P50613 346 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 BEX3Q00994 111 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 PPARAQ07869 468 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 NR1H3Q13133 447 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 MCM6Q14566 821 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 MRPL14Q6P1L8 145 aaKnown RBP10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 CCDC144CPQ8IYA2 1237 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 ANKRD35Q8N283 1001 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 NEDD1Q8NHV4 660 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 TOX2Q96NM4 488 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 PURBQ96QR8 312 aaKnown RBP10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 CHMP4BQ9H444 224 aaKnown RBP10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 A1CFQ9NQ94 594 aaKnown RBP10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 FEM1BQ9UK73 627 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 CHD7Q9P2D1 2997 aa10.35□□□□□ -0.75
ATP2B1-207ENST00000550716 UMODL1Q5DID0 1318 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 DCDC2CA8MYV0 355 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 PATL2C9JE40 543 aaKnown RBP10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 TIMP1P01033 207 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 ZFYP08048 801 aaPredicted RBP10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 ACRP10323 421 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 BMP3P12645 472 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 SNRPBP14678 240 aaKnown RBP10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 CSF2RAP15509 400 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 MCCP23508 829 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 GJA9P57773 515 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 TFAP4Q01664 338 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 AAMPQ13685 434 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 MUM1L1Q5H9M0 696 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 ZMYM1Q5SVZ6 1142 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 VPS53Q5VIR6 699 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 KCTD1Q719H9 257 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 FAM126BQ8IXS8 530 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 FAM133AQ8N9E0 248 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 CHST13Q8NET6 341 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 NUP133Q8WUM0 1156 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 PRM3Q9NNZ6 103 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 IL17RBQ9NRM6 502 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 RNF146Q9NTX7 359 aa10.34□□□□□ -0.75
ATP2B1-207ENST00000550716 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms