RNA–Protein interactions for RNA: ENST00000546907.1

TPCN1-208, Transcript of two pore segment channel 1, humanhuman

TSL 4

Gene TPCN1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-208ENST00000546907 SCLYQ96I15 445 aa17.59■□□□□ 0.41
TPCN1-208ENST00000546907 PIGSQ96S52 555 aa17.59■□□□□ 0.41
TPCN1-208ENST00000546907 MTIF3Q9H2K0 278 aaKnown RBP17.59■□□□□ 0.41
TPCN1-208ENST00000546907 MAP3K20Q9NYL2 800 aaKnown RBP17.59■□□□□ 0.41
TPCN1-208ENST00000546907 CXXC1Q9P0U4 656 aaPredicted RBP17.59■□□□□ 0.41
TPCN1-208ENST00000546907 NCOR1O75376 2440 aa17.59■□□□□ 0.41
TPCN1-208ENST00000546907 CYTH3O43739 400 aa17.58■□□□□ 0.4
TPCN1-208ENST00000546907 PTPN11Q06124 597 aaPredicted RBP17.58■□□□□ 0.4
TPCN1-208ENST00000546907 TRAF1Q13077 416 aa17.58■□□□□ 0.4
TPCN1-208ENST00000546907 CATIPQ7Z7H3 387 aa17.58■□□□□ 0.4
TPCN1-208ENST00000546907 RPUSD2Q8IZ73 545 aaKnown RBP17.58■□□□□ 0.4
TPCN1-208ENST00000546907 MAFAQ8NHW3 353 aaPredicted RBP17.58■□□□□ 0.4
TPCN1-208ENST00000546907 IGDCC4Q8TDY8 1250 aa17.58■□□□□ 0.4
TPCN1-208ENST00000546907 VWCEQ96DN2 955 aa17.58■□□□□ 0.4
TPCN1-208ENST00000546907 PDCD2LQ9BRP1 358 aa17.58■□□□□ 0.4
TPCN1-208ENST00000546907 PBX4Q9BYU1 374 aa17.58■□□□□ 0.4
TPCN1-208ENST00000546907 REV3LO60673 3130 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 PNMA6FA0A0J9YX94 578 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 DLL1O00548 723 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 FOSL2P15408 326 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 HOXA13P31271 388 aaPredicted RBP17.57■□□□□ 0.4
TPCN1-208ENST00000546907 PBX2P40425 430 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 GRIN2CQ14957 1233 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 OTOP2Q7RTS6 562 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 LSG1Q9H089 658 aaKnown RBP17.57■□□□□ 0.4
TPCN1-208ENST00000546907 ZNF576Q9H609 170 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 DDX41Q9UJV9 622 aaKnown RBP17.57■□□□□ 0.4
TPCN1-208ENST00000546907 MRVI1Q9Y6F6 885 aa17.57■□□□□ 0.4
TPCN1-208ENST00000546907 RGS20O76081 388 aa17.56■□□□□ 0.4
TPCN1-208ENST00000546907 PGM5Q15124 567 aa17.56■□□□□ 0.4
TPCN1-208ENST00000546907 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.56■□□□□ 0.4
TPCN1-208ENST00000546907 IL31RAQ8NI17 732 aa17.56■□□□□ 0.4
TPCN1-208ENST00000546907 KAT2BQ92831 832 aa17.56■□□□□ 0.4
TPCN1-208ENST00000546907 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
TPCN1-208ENST00000546907 ESYT1Q9BSJ8 1104 aa17.56■□□□□ 0.4
TPCN1-208ENST00000546907 LY9Q9HBG7 655 aa17.56■□□□□ 0.4
TPCN1-208ENST00000546907 PTPRSQ13332 1948 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 GCOM1H8Y6P7 765 aaPredicted RBP17.55■□□□□ 0.4
TPCN1-208ENST00000546907 PITPNM1O00562 1244 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 DDAH1O94760 285 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 PFKMP08237 780 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 POLR2MP0CAP2 368 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 MYCLP12524 364 aaPredicted RBP17.55■□□□□ 0.4
TPCN1-208ENST00000546907 CASTP20810 708 aaKnown RBP17.55■□□□□ 0.4
TPCN1-208ENST00000546907 CHMP4BP1P59074 171 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 RAB30Q15771 203 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 DGKDQ16760 1214 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 CASC1Q6TDU7 716 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 VSIG10LQ86VR7 867 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 MAP3K14Q99558 947 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 MTA3Q9BTC8 594 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 NOD1Q9Y239 953 aa17.55■□□□□ 0.4
TPCN1-208ENST00000546907 KAT6AQ92794 2004 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 PRC1O43663 620 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 LAMC2Q13753 1193 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 KCNV1Q6PIU1 500 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 SESTD1Q86VW0 696 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 DHX37Q8IY37 1157 aaKnown RBP17.54■□□□□ 0.4
TPCN1-208ENST00000546907 PPTC7Q8NI37 304 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 MYL10Q9BUA6 226 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 SPZ1Q9BXG8 430 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 MSRAQ9UJ68 235 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 SLC4A7Q9Y6M7 1214 aa17.54■□□□□ 0.4
TPCN1-208ENST00000546907 SLC27A2O14975 620 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 HOXD8P13378 290 aaPredicted RBP17.53■□□□□ 0.4
TPCN1-208ENST00000546907 CCND2P30279 289 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 KIF5BP33176 963 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 MCM5P33992 734 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 RFC2P35250 354 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 BFSP2Q13515 415 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 PTGISQ16647 500 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 GDF6Q6KF10 455 aaPredicted RBP17.53■□□□□ 0.4
TPCN1-208ENST00000546907 DEFB128Q7Z7B8 93 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 FCHSD1Q86WN1 690 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 RETREG2Q8NC44 543 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 CTCFLQ8NI51 663 aaPredicted RBP17.53■□□□□ 0.4
TPCN1-208ENST00000546907 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 CTAGE1Q96RT6 745 aa17.53■□□□□ 0.4
TPCN1-208ENST00000546907 SPTBN5Q9NRC6 3674 aaKnown RBP17.53■□□□□ 0.4
TPCN1-208ENST00000546907 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 ZBBXA8MT70 800 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 SH2B2O14492 632 aaPredicted RBP17.52■□□□□ 0.4
TPCN1-208ENST00000546907 F2P00734 622 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 ZNF286BP0CG31 522 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 UBA1P22314 1058 aaKnown RBP17.52■□□□□ 0.4
TPCN1-208ENST00000546907 PSEN2P49810 448 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 COL9A3Q14050 684 aaPredicted RBP17.52■□□□□ 0.4
TPCN1-208ENST00000546907 MYSM1Q5VVJ2 828 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 CREB3L3Q68CJ9 461 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 CCDC155Q8N6L0 562 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 TMEM87BQ96K49 555 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 ANO2Q9NQ90 1003 aa17.52■□□□□ 0.4
TPCN1-208ENST00000546907 YBX2Q9Y2T7 364 aaKnown RBP17.52■□□□□ 0.4
TPCN1-208ENST00000546907 GGPS1O95749 300 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 IQCF3P0C7M6 154 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 TGFB3P10600 412 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 SMARCA1P28370 1054 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 NECTIN1Q15223 517 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 BMP2KLQ5H9B9 411 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms