RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 PLIN4Q96Q06 1357 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 PRPF3O43395 683 aaKnown RBP9.35□□□□□ -0.91
LMO3-226ENST00000541589 DNAJB2P25686 324 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 KIF5BP33176 963 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 AKAP17AQ02040 695 aaKnown RBP9.35□□□□□ -0.91
LMO3-226ENST00000541589 FUT2Q10981 343 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 TRIM60Q495X7 471 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 GJC2Q5T442 439 aaPredicted RBP9.35□□□□□ -0.91
LMO3-226ENST00000541589 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 LRSAM1Q6UWE0 723 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 SLC44A5Q8NCS7 719 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 GTF3C2Q8WUA4 911 aaPredicted RBP9.35□□□□□ -0.91
LMO3-226ENST00000541589 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
LMO3-226ENST00000541589 ZNF576Q9H609 170 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 PRDM5Q9NQX1 630 aaPredicted RBP9.35□□□□□ -0.91
LMO3-226ENST00000541589 IL17RBQ9NRM6 502 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 GJB4Q9NTQ9 266 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 THEGQ9P2T0 379 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 MYH1P12882 1939 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 NCOR1O75376 2440 aa9.35□□□□□ -0.91
LMO3-226ENST00000541589 SYCE3A1L190 88 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 KIF28PB7ZC32 967 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 C19orf81C9J6K1 198 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 CNMDO75829 334 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 PLEKHA8P1O95397 391 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 YEATS4O95619 227 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 MMP1P03956 469 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 HLA-DOAP06340 250 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 CYBAP13498 195 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 XBP1P17861 261 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 U2AF2P26368 475 aaKnown RBP eCLIP9.34□□□□□ -0.91
LMO3-226ENST00000541589 GUCY1A2P33402 732 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 NASPP49321 788 aaPredicted RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 GNAQP50148 359 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 JAG1P78504 1218 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 MRPS5P82675 430 aaKnown RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 GABPAQ06546 454 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 GNL2Q13823 731 aaKnown RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 SAFBQ15424 915 aaKnown RBP eCLIP9.34□□□□□ -0.91
LMO3-226ENST00000541589 PNMA1Q8ND90 353 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 PGBD1Q96JS3 809 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 C1QTNF1Q9BXJ1 281 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 TMOD4Q9NZQ9 345 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 BDP1A6H8Y1 2624 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 CNTNAP5Q8WYK1 1306 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 SLC15A5A6NIM6 579 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 XRCC6P12956 609 aaKnown RBP eCLIP9.34□□□□□ -0.91
LMO3-226ENST00000541589 FECHP22830 423 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 CNGA1P29973 690 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 NOVP48745 357 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 GRM4Q14833 912 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 CMTR1Q8N1G2 835 aaKnown RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 CCDC82Q8N4S0 544 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 ARRDC4Q8NCT1 418 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 NPLOC4Q8TAT6 608 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 BICD2Q8TD16 824 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 KCNG4Q8TDN1 519 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.34□□□□□ -0.91
LMO3-226ENST00000541589 EHD4Q9H223 541 aa9.34□□□□□ -0.91
LMO3-226ENST00000541589 FOXP1Q9H334 677 aaPredicted RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 DDX19AQ9NUU7 478 aaKnown RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 HERC5Q9UII4 1024 aaKnown RBP9.34□□□□□ -0.91
LMO3-226ENST00000541589 ATAD5Q96QE3 1844 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 USP17L10C9JJH3 530 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 TOP1P11387 765 aaKnown RBP9.33□□□□□ -0.92
LMO3-226ENST00000541589 LIG1P18858 919 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 CYP2C19P33261 490 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 ATP2B2Q01814 1243 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 CEBPZQ03701 1054 aaKnown RBP9.33□□□□□ -0.92
LMO3-226ENST00000541589 GRB14Q14449 540 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 STK38Q15208 465 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 PKN1Q16512 942 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 TPRNQ4KMQ1 711 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 ANO1Q5XXA6 986 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 NOSTRINQ8IVI9 506 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 CCAR1Q8IX12 1150 aaKnown RBP9.33□□□□□ -0.92
LMO3-226ENST00000541589 DIS3L2Q8IYB7 885 aaKnown RBP9.33□□□□□ -0.92
LMO3-226ENST00000541589 SRBD1Q8N5C6 995 aaKnown RBP9.33□□□□□ -0.92
LMO3-226ENST00000541589 LINC00301Q8NCQ3 95 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 TIFAQ96CG3 184 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 TMEM47Q9BQJ4 181 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 PAGR1Q9BTK6 254 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 FTOQ9C0B1 505 aaKnown RBP eCLIP9.33□□□□□ -0.92
LMO3-226ENST00000541589 DHX36Q9H2U1 1008 aaKnown RBP9.33□□□□□ -0.92
LMO3-226ENST00000541589 TSPY26PQ9H489 355 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 SERPINB13Q9UIV8 391 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 RABGAP1Q9Y3P9 1069 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 V9GY48 417 aaPredicted RBP9.33□□□□□ -0.92
LMO3-226ENST00000541589 XIRP2A4UGR9 3374 aa9.33□□□□□ -0.92
LMO3-226ENST00000541589 A0A1W2PQ27 194 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 A0A1W2PQ64 194 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 A0A1W2PQD8 194 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 RCCD1A6NED2 376 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 KBTBD13C9JR72 458 aa9.32□□□□□ -0.92
LMO3-226ENST00000541589 KIAA0355O15063 1070 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms