RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 LRRC41Q15345 812 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 ZSCAN26Q16670 478 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 MAP9Q49MG5 647 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 TMEM119Q4V9L6 283 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 LRRC55Q6ZSA7 311 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 GPIHBP1Q8IV16 184 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 GLIS3Q8NEA6 775 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 TRIM58Q8NG06 486 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 SH2D4AQ9H788 454 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 CAPN6Q9Y6Q1 641 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 ABCB11O95342 1321 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 LRRC53A6NM62 1247 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 C6orf229H3BNL8 230 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 PHACTR2O75167 634 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 TACC1O75410 805 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 ZMYND10O75800 440 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 EIF4A3P38919 411 aaKnown RBP15.9■□□□□ 0.14
USP44-203ENST00000537435 GTF2IP78347 998 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 ECM1Q16610 540 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 RRAGAQ7L523 313 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 CCDC84Q86UT8 332 aaPredicted RBP15.9■□□□□ 0.14
USP44-203ENST00000537435 JMJD4Q9H9V9 463 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 MLXIPQ9HAP2 919 aa15.9■□□□□ 0.14
USP44-203ENST00000537435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.89■□□□□ 0.13
USP44-203ENST00000537435 IGKV6D-41A0A0C4DH26 115 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 ATP2B2Q01814 1243 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 EHHADHQ08426 723 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 C2orf54Q08AI8 447 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 ADGRF4Q8IZF3 695 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
USP44-203ENST00000537435 LRRC27Q9C0I9 530 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 RIC8AQ9NPQ8 531 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 PODXL2Q9NZ53 605 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 JRKLQ9Y4A0 524 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 LTBP4Q8N2S1 1624 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 PNMA6FA0A0J9YX94 578 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 AKR1B10O60218 316 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 PPP1R11O60927 126 aaPredicted RBP15.89■□□□□ 0.13
USP44-203ENST00000537435 SERPINB2P05120 415 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 ZNF543Q08ER8 600 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 PSMD2Q13200 908 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 PPP4R3AQ6IN85 833 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 GJA10Q969M2 543 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 TSG101Q99816 390 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 VIPAS39Q9H9C1 493 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 MED4Q9NPJ6 270 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 SNX12Q9UMY4 172 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 NHSQ6T4R5 1651 aa15.89■□□□□ 0.13
USP44-203ENST00000537435 F8W031 263 aaPredicted RBP15.88■□□□□ 0.13
USP44-203ENST00000537435 BBOX1O75936 387 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 MOCS3O95396 460 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 LCA5LO95447 670 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 TTLL1O95922 423 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 TTBK2Q6IQ55 1244 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 BAP1Q92560 729 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 HAS1Q92839 578 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 DRC1Q96MC2 740 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 DDX4Q9NQI0 724 aaKnown RBP15.88■□□□□ 0.13
USP44-203ENST00000537435 DDX25Q9UHL0 483 aaKnown RBP15.88■□□□□ 0.13
USP44-203ENST00000537435 CLK2P49760 499 aaKnown RBP15.88■□□□□ 0.13
USP44-203ENST00000537435 COASYQ13057 564 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 IQCEQ6IPM2 695 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 CREG2Q8IUH2 290 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 GSPT2Q8IYD1 628 aaKnown RBP15.88■□□□□ 0.13
USP44-203ENST00000537435 CCDC155Q8N6L0 562 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 GOLGA5Q8TBA6 731 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 TANGO6Q9C0B7 1094 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
USP44-203ENST00000537435 MARCH6O60337 910 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 GYS1P13807 737 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 MYOCDQ8IZQ8 938 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 DNAJC19Q96DA6 116 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 GDAP1L1Q96MZ0 367 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 HPCAL4Q9UM19 191 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 TAF1LQ8IZX4 1826 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 MYBL2P10244 700 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 CAPN2P17655 700 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 ACTN2P35609 894 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 SLC16A2P36021 539 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 AARSP49588 968 aaKnown RBP eCLIP15.87■□□□□ 0.13
USP44-203ENST00000537435 PDXDC1Q6P996 788 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 CACNA2D4Q7Z3S7 1137 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 COG1Q8WTW3 980 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 CUL5Q93034 780 aa15.87■□□□□ 0.13
USP44-203ENST00000537435 RIMBP2O15034 1052 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 SYF2O95926 243 aaKnown RBP15.86■□□□□ 0.13
USP44-203ENST00000537435 ADRA2BP18089 450 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 HOXA7P31268 230 aaPredicted RBP15.86■□□□□ 0.13
USP44-203ENST00000537435 MAGEA1P43355 309 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 KCNMA1Q12791 1236 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 CCNI2Q6ZMN8 369 aaPredicted RBP15.86■□□□□ 0.13
USP44-203ENST00000537435 PROM2Q8N271 834 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 SERPINB13Q9UIV8 391 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 SSBP05455 408 aaKnown RBP eCLIP15.86■□□□□ 0.13
USP44-203ENST00000537435 MRPL12P52815 198 aaKnown RBP15.86■□□□□ 0.13
USP44-203ENST00000537435 FAM26FQ5R3K3 315 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 TRERF1Q96PN7 1200 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 ALS2CR12Q96Q35 445 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms