RNA–Protein interactions for RNA: ENST00000536917.1

LRTOMT-212, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-212ENST00000536917 AFG1LQ8WV93 481 aa9.46□□□□□ -0.9
LRTOMT-212ENST00000536917 PDCD2LQ9BRP1 358 aa9.46□□□□□ -0.9
LRTOMT-212ENST00000536917 ZNF576Q9H609 170 aa9.46□□□□□ -0.9
LRTOMT-212ENST00000536917 BRWD1Q9NSI6 2320 aa9.46□□□□□ -0.9
LRTOMT-212ENST00000536917 PTPRSQ13332 1948 aa9.46□□□□□ -0.9
LRTOMT-212ENST00000536917 PRRC2BQ5JSZ5 2229 aaKnown RBP9.46□□□□□ -0.9
LRTOMT-212ENST00000536917 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 GH1P01241 217 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 NR3C2P08235 984 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 PFKMP08237 780 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 MMP3P08254 477 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 EIF2AK2P19525 551 aaKnown RBP9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 TRDNQ13061 729 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 GPNMBQ14956 572 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 BRDTQ58F21 947 aaPredicted RBP9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 SEPT14Q6ZU15 432 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 PPP1R13LQ8WUF5 828 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 SCLYQ96I15 445 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 YBX2Q9Y2T7 364 aaKnown RBP9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 PCDHA1Q9Y5I3 950 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 FRMPD4Q14CM0 1322 aa9.45□□□□□ -0.9
LRTOMT-212ENST00000536917 HAS3O00219 553 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 IFIT3O14879 490 aaKnown RBP9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 DHX16O60231 1041 aaKnown RBP9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 F2P00734 622 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 CFBP00751 764 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 IQCF3P0C7M6 154 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 FOSL2P15408 326 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 RBL2Q08999 1139 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 ARHGEF16Q5VV41 709 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 CHST3Q7LGC8 479 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 OTOP2Q7RTS6 562 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 RPUSD2Q8IZ73 545 aaKnown RBP9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 USP38Q8NB14 1042 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 IL31RAQ8NI17 732 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 DHX38Q92620 1227 aaKnown RBP9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 PIGSQ96S52 555 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 MAP3K14Q99558 947 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 MTA3Q9BTC8 594 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 COL25A1Q9BXS0 654 aaPredicted RBP9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 LSG1Q9H089 658 aaKnown RBP9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 LY9Q9HBG7 655 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 RBM8AQ9Y5S9 174 aaKnown RBP9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 DOCK5Q9H7D0 1870 aa9.44□□□□□ -0.9
LRTOMT-212ENST00000536917 PNMA6FA0A0J9YX94 578 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 SMARCA1P28370 1054 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 HOXA13P31271 388 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 RFC2P35250 354 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 SP2Q02086 613 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 LAMC2Q13753 1193 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 ADGRE1Q14246 886 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 WTAPQ15007 396 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 PGM5Q15124 567 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 RAB30Q15771 203 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 TRAF7Q6Q0C0 670 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 PPTC7Q8NI37 304 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 MTIF3Q9H2K0 278 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 GTF2IRD1Q9UHL9 959 aa9.43□□□□□ -0.9
LRTOMT-212ENST00000536917 GCOM1H8Y6P7 765 aaPredicted RBP9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 PPFIA4O75335 1185 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 POLR2MP0CAP2 368 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 TGFB3P10600 412 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 CASTP20810 708 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 HOXC8P31273 242 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 MRPS9P82933 396 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 TRAF1Q13077 416 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 BFSP2Q13515 415 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 HIC1Q14526 733 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 SART3Q15020 963 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 NECTIN1Q15223 517 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 PTGISQ16647 500 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 DGKDQ16760 1214 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 TRIM71Q2Q1W2 868 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 FAM47CQ5HY64 1035 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 CELF3Q5SZQ8 465 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 KCNV1Q6PIU1 500 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 RALYLQ86SE5 291 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 HOMER1Q86YM7 354 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 ESYT1Q9BSJ8 1104 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 SPZ1Q9BXG8 430 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 NKX2-4Q9H2Z4 354 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 MSRAQ9UJ68 235 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 PCDHA11Q9Y5I1 949 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 MRVI1Q9Y6F6 885 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 SLC4A7Q9Y6M7 1214 aa9.42□□□□□ -0.9
LRTOMT-212ENST00000536917 ERICH2A1L162 156 aa9.41□□□□□ -0.9
LRTOMT-212ENST00000536917 PIK3CDO00329 1044 aa9.41□□□□□ -0.9
LRTOMT-212ENST00000536917 SH2B2O14492 632 aaPredicted RBP9.41□□□□□ -0.9
LRTOMT-212ENST00000536917 MEIS2O14770 477 aa9.41□□□□□ -0.9
LRTOMT-212ENST00000536917 SLC27A2O14975 620 aa9.41□□□□□ -0.9
LRTOMT-212ENST00000536917 DDAH1O94760 285 aa9.41□□□□□ -0.9
LRTOMT-212ENST00000536917 CXCL10P02778 98 aa9.41□□□□□ -0.9
LRTOMT-212ENST00000536917 MYOGP15173 224 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms