RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 KCNB2Q92953 911 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 TMEM87BQ96K49 555 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 ASB2Q96Q27 587 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 PCDHA11Q9Y5I1 949 aa14.47□□□□□ -0.09
PRKDC-207ENST00000536483 GBF1Q92538 1859 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 ABCB11O95342 1321 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 NKRFO15226 690 aaKnown RBP eCLIP14.46□□□□□ -0.09
PRKDC-207ENST00000536483 NEFLP07196 543 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 MCM5P33992 734 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 MRPS5P82675 430 aaKnown RBP14.46□□□□□ -0.09
PRKDC-207ENST00000536483 SLC35G1Q2M3R5 365 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 QRICH1Q2TAL8 776 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 USH1GQ495M9 461 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 BRDTQ58F21 947 aaPredicted RBP14.46□□□□□ -0.09
PRKDC-207ENST00000536483 CASC1Q6TDU7 716 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 SCFD2Q8WU76 684 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 MPHOSPH6Q99547 160 aaKnown RBP14.46□□□□□ -0.09
PRKDC-207ENST00000536483 CPVLQ9H3G5 476 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 LY9Q9HBG7 655 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 SENP2Q9HC62 589 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 ANO2Q9NQ90 1003 aa14.46□□□□□ -0.09
PRKDC-207ENST00000536483 MAP3K20Q9NYL2 800 aaKnown RBP14.46□□□□□ -0.09
PRKDC-207ENST00000536483 A6NJR5 290 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 ZBTB5O15062 677 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 EPB41L2O43491 1005 aaKnown RBP14.45□□□□□ -0.1
PRKDC-207ENST00000536483 ARIH2O95376 493 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 TXNP10599 105 aaKnown RBP14.45□□□□□ -0.1
PRKDC-207ENST00000536483 TRAF1Q13077 416 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 TMEM67Q5HYA8 995 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 RNF20Q5VTR2 975 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 NFRKBQ6P4R8 1299 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 FBXO11Q86XK2 927 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 MCF2L2Q86YR7 1114 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 MICALL1Q8N3F8 863 aa14.45□□□□□ -0.1
PRKDC-207ENST00000536483 MRPL11Q9Y3B7 192 aaKnown RBP14.45□□□□□ -0.1
PRKDC-207ENST00000536483 RFXAPO00287 272 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 SH2B2O14492 632 aaPredicted RBP14.44□□□□□ -0.1
PRKDC-207ENST00000536483 PRC1O43663 620 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 KPNA6O60684 536 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 DDAH1O94760 285 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 IQCF3P0C7M6 154 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 CHMP4BP1P59074 171 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 EXOSC10Q01780 885 aaKnown RBP14.44□□□□□ -0.1
PRKDC-207ENST00000536483 CATIPQ7Z7H3 387 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 SGMS1Q86VZ5 419 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 ADAMTS19Q8TE59 1207 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 TBC1D5Q92609 795 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 AMNQ9BXJ7 453 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 PPP4R2Q9NY27 417 aa14.44□□□□□ -0.1
PRKDC-207ENST00000536483 SCN10AQ9Y5Y9 1956 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 SCN5AQ14524 2016 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 REV3LO60673 3130 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 B4DLN1 442 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 OPLAHO14841 1288 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 CYTH3O43739 400 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 CA3P07451 260 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 ACTN1P12814 892 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 RFC2P35250 354 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 HSD17B4P51659 736 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 MRPL12P52815 198 aaKnown RBP14.43□□□□□ -0.1
PRKDC-207ENST00000536483 PTPN11Q06124 597 aaPredicted RBP14.43□□□□□ -0.1
PRKDC-207ENST00000536483 COL9A3Q14050 684 aaPredicted RBP14.43□□□□□ -0.1
PRKDC-207ENST00000536483 CHST3Q7LGC8 479 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 ZNF654Q8IZM8 581 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 LZTS2Q9BRK4 669 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 SPZ1Q9BXG8 430 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 FTOQ9C0B1 505 aaKnown RBP eCLIP14.43□□□□□ -0.1
PRKDC-207ENST00000536483 CERS4Q9HA82 394 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 NOD1Q9Y239 953 aa14.43□□□□□ -0.1
PRKDC-207ENST00000536483 PNMA6FA0A0J9YX94 578 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 PITPNM1O00562 1244 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 PPP1R11O60927 126 aaPredicted RBP14.42□□□□□ -0.1
PRKDC-207ENST00000536483 KRT32Q14532 448 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 CCDC62Q6P9F0 684 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 SEPT14Q6ZU15 432 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 RASEFQ8IZ41 740 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 FBXL16Q8N461 479 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 IL27Q8NEV9 243 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 SYTL5Q8TDW5 730 aaPredicted RBP14.42□□□□□ -0.1
PRKDC-207ENST00000536483 AFG1LQ8WV93 481 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 TAAR1Q96RJ0 339 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 IWS1Q96ST2 819 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 SLC9A7Q96T83 725 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 UHRF1Q96T88 793 aaPredicted RBP14.42□□□□□ -0.1
PRKDC-207ENST00000536483 TSPYL2Q9H2G4 693 aaPredicted RBP14.42□□□□□ -0.1
PRKDC-207ENST00000536483 NCOR1O75376 2440 aa14.42□□□□□ -0.1
PRKDC-207ENST00000536483 CALM1P0DP23 149 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 CALM2P0DP24 149 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 CALM3P0DP25 149 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 KIF5BP33176 963 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 GNAQP50148 359 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 BFSP2Q13515 415 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 PTGISQ16647 500 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 LY6KQ17RY6 165 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 DHX32Q7L7V1 743 aaKnown RBP14.41□□□□□ -0.1
PRKDC-207ENST00000536483 PHOSPHO2Q8TCD6 241 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 NEK1Q96PY6 1258 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 VAT1LQ9HCJ6 419 aa14.41□□□□□ -0.1
PRKDC-207ENST00000536483 COL20A1Q9P218 1284 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms