RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 TBCKQ8TEA7 893 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 BAP1Q92560 729 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 SMCO2A6NFE2 343 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 KLRC1P26715 233 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 EMBQ6PCB8 327 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 TMED8Q6PL24 325 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-214ENST00000535493 KCNK18Q7Z418 384 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 FAM114A1Q8IWE2 563 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 CASKIN2Q8WXE0 1202 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 PIK3R5Q8WYR1 880 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 ADAMTS1Q9UHI8 967 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 TLR2O60603 784 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 ADAMTS2O95450 1211 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 TSPY3P0CV98 308 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 TSPY8P0CW00 308 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 HDLBPQ00341 1268 aaKnown RBP14.81□□□□□ -0.04
HDAC4-214ENST00000535493 MCTP2Q6DN12 878 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 NOC3LQ8WTT2 800 aaKnown RBP14.81□□□□□ -0.04
HDAC4-214ENST00000535493 TBC1D5Q92609 795 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 CCDC47Q96A33 483 aaKnown RBP14.81□□□□□ -0.04
HDAC4-214ENST00000535493 NOX5Q96PH1 765 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 FGFBP2Q9BYJ0 223 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 BARHL2Q9NY43 387 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 BCCIPQ9P287 314 aaKnown RBP eCLIP14.81□□□□□ -0.04
HDAC4-214ENST00000535493 KLRF2D3W0D1 207 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 SSBP05455 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
HDAC4-214ENST00000535493 POLR2FP61218 127 aaKnown RBP14.81□□□□□ -0.04
HDAC4-214ENST00000535493 KCNMA1Q12791 1236 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 IFT88Q13099 833 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 HLTFQ14527 1009 aaKnown RBP eCLIP14.81□□□□□ -0.04
HDAC4-214ENST00000535493 CFAP221Q4G0U5 840 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 CEP85LQ5SZL2 805 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 HGSNATQ68CP4 663 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 CENPPQ6IPU0 288 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 NELFCDQ8IXH7 590 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 IQCKQ8N0W5 287 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 JPH2Q9BR39 696 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-214ENST00000535493 BCL9O00512 1426 aa14.81□□□□□ -0.04
HDAC4-214ENST00000535493 A0A1W2PQJ5 194 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 ITPK1Q13572 414 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 GRIK5Q16478 980 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 NAA35Q5VZE5 725 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 CNNM4Q6P4Q7 775 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 DHX37Q8IY37 1157 aaKnown RBP14.8□□□□□ -0.04
HDAC4-214ENST00000535493 C7orf25Q9BPX7 421 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 TMEM47Q9BQJ4 181 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 CD248Q9HCU0 757 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 BLOC1S4Q9NUP1 217 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 CCDC87Q9NVE4 849 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 E7EVH7 732 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 ATP2C2O75185 946 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 NR1D1P20393 614 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 SH3RF3Q8TEJ3 882 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-214ENST00000535493 AP1M1Q9BXS5 423 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 CACNA1SQ13698 1873 aa14.8□□□□□ -0.04
HDAC4-214ENST00000535493 RAD51CO43502 376 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 KIAA0754O94854 1291 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 TMOD1P28289 359 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 CDK17Q00537 523 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 GRB10Q13322 594 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 ALS2CLQ60I27 953 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 GBP6Q6ZN66 633 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 SV2BQ7L1I2 683 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 IFT20Q8IY31 132 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 TGFBRAP1Q8WUH2 860 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 GPR101Q96P66 508 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-214ENST00000535493 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.79□□□□□ -0.04
HDAC4-214ENST00000535493 SHANK3Q9BYB0 1731 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 A0A087X0T9 212 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 SLC37A4O43826 429 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 TDP2O95551 362 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 FAM228BP0C875 321 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 HNRNPH3P31942 346 aaKnown RBP14.79□□□□□ -0.04
HDAC4-214ENST00000535493 MAN2A1Q16706 1144 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 ASTE1Q2TB18 679 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-214ENST00000535493 FIGNQ5HY92 759 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 MAPKAPK5Q8IW41 473 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 FAM133AQ8N9E0 248 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 LRRC4CQ9HCJ2 640 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 PLAAQ9Y263 795 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 TRAF5O00463 557 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 RAPGEF1Q13905 1077 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 UBE4AQ14139 1066 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
HDAC4-214ENST00000535493 ECM1Q16610 540 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 KIAA0753Q2KHM9 967 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 SPRED3Q2MJR0 410 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 PDXDC1Q6P996 788 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 DZIP1Q86YF9 867 aaKnown RBP14.79□□□□□ -0.04
HDAC4-214ENST00000535493 SUGP1Q8IWZ8 645 aaKnown RBP14.79□□□□□ -0.04
HDAC4-214ENST00000535493 DDX12PQ92771 950 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 CAVIN3Q969G5 261 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 COA7Q96BR5 231 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 CALML4Q96GE6 196 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 PIGSQ96S52 555 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 CCT8L2Q96SF2 557 aa14.79□□□□□ -0.04
HDAC4-214ENST00000535493 PRLRP16471 622 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 SKOR1P84550 965 aa14.78□□□□□ -0.04
HDAC4-214ENST00000535493 GRM4Q14833 912 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms