RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CASC1Q6TDU7 716 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 OTOP2Q7RTS6 562 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 TMTC2Q8N394 836 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 RETREG2Q8NC44 543 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 IGDCC4Q8TDY8 1250 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 MYLIPQ8WY64 445 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 PIGSQ96S52 555 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 WNT8AQ9H1J5 351 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 ZNF576Q9H609 170 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 MSRAQ9UJ68 235 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 DDX41Q9UJV9 622 aaKnown RBP14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 NOD1Q9Y239 953 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 RBM8AQ9Y5S9 174 aaKnown RBP14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 MRVI1Q9Y6F6 885 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 TAF6LQ9Y6J9 622 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 CHD9Q3L8U1 2897 aa14.39□□□□□ -0.11
CAPRIN1-213ENST00000533562 MMP3P08254 477 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 MYCLP12524 364 aaPredicted RBP14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 FOSL2P15408 326 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 KIF5BP33176 963 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 ARHGAP1Q07960 439 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 BFSP2Q13515 415 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 RAB30Q15771 203 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 VSIG10LQ86VR7 867 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 DHX37Q8IY37 1157 aaKnown RBP14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 MAFAQ8NHW3 353 aaPredicted RBP14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 EMID1Q96A84 441 aaPredicted RBP14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 SCLYQ96I15 445 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 MAP3K14Q99558 947 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 PDCD2LQ9BRP1 358 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 MTA3Q9BTC8 594 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 PBX4Q9BYU1 374 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 SENP2Q9HC62 589 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 SCN10AQ9Y5Y9 1956 aa14.38□□□□□ -0.11
CAPRIN1-213ENST00000533562 VCANP13611 3396 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 GRXCR1A8MXD5 290 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 PITPNM1O00562 1244 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 CYTH3O43739 400 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 TGFB3P10600 412 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 HOXA13P31271 388 aaPredicted RBP14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 MCM5P33992 734 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 RFC2P35250 354 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 GRIN2CQ14957 1233 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 MB21D2Q8IYB1 491 aaPredicted RBP14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 CTCFLQ8NI51 663 aaPredicted RBP14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 LZTS2Q9BRK4 669 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 CXXC1Q9P0U4 656 aaPredicted RBP14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 SLC4A7Q9Y6M7 1214 aa14.37□□□□□ -0.11
CAPRIN1-213ENST00000533562 PPFIA4O75335 1185 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 DDAH1O94760 285 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 ACTN1P12814 892 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 SMARCA1P28370 1054 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 CCND2P30279 289 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 PBX2P40425 430 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 GNAQP50148 359 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 ANTXR2P58335 489 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 PGM5Q15124 567 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 PTGISQ16647 500 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 SLC35G1Q2M3R5 365 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 SESTD1Q86VW0 696 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 FCHSD1Q86WN1 690 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 CCDC155Q8N6L0 562 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 C7orf31Q8N865 590 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 PPTC7Q8NI37 304 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 KATNAL1Q9BW62 490 aa14.36□□□□□ -0.11
CAPRIN1-213ENST00000533562 KIAA1217Q5T5P2 1943 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 ZBBXA8MT70 800 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 PRC1O43663 620 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 IQCF3P0C7M6 154 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 MYSM1Q5VVJ2 828 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 DEFB128Q7Z7B8 93 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 ZNF654Q8IZM8 581 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 CAGE1Q8TC20 777 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 PPP1R13LQ8WUF5 828 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 KAT2BQ92831 832 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 RRP36Q96EU6 259 aaKnown RBP14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 TMEM87BQ96K49 555 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 GAS2L1Q99501 681 aaPredicted RBP14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 ESYT1Q9BSJ8 1104 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 SPZ1Q9BXG8 430 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 LSG1Q9H089 658 aaKnown RBP14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 SLC28A3Q9HAS3 691 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 LY9Q9HBG7 655 aa14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 SEC63Q9UGP8 760 aaKnown RBP14.35□□□□□ -0.11
CAPRIN1-213ENST00000533562 STAM2O75886 525 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 RGS20O76081 388 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 CALM1P0DP23 149 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 CALM2P0DP24 149 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 CALM3P0DP25 149 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 CELF3Q5SZQ8 465 aaKnown RBP14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 CENPQQ7L2Z9 268 aaPredicted RBP14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 CUL5Q93034 780 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 SPATA33Q96N06 139 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 FTOQ9C0B1 505 aaKnown RBP eCLIP14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 MLXIPQ9HAP2 919 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 ANO2Q9NQ90 1003 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms