RNA–Protein interactions for RNA: ENST00000533044.5

GRINA-208, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, human

TSL 3

Gene GRINA, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRINA-208	ENST00000533044	PPFIA4	O75335	1185 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	ARIH2	O95376	493 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	CFB	P00751	764 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	ACTN1	P12814	892 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	KIF5B	P33176	963 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	ARHGAP1	Q07960	439 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	RBL2	Q08999	1139 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	DGKD	Q16760	1214 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	CATIP	Q7Z7H3	387 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	VSIG10L	Q86VR7	867 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	STAG2	Q8N3U4	1231 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	RETREG2	Q8NC44	543 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	PPTC7	Q8NI37	304 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	PHOSPHO2	Q8TCD6	241 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	AFAP1L1	Q8TED9	768 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	TBC1D5	Q92609	795 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	PDCD2L	Q9BRP1	358 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	PBX4	Q9BYU1	374 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	VAT1L	Q9HCJ6	419 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	PRDM6	Q9NQX0	595 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	TRMT13	Q9NUP7	481 aa	Known RBP	10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	COL20A1	Q9P218	1284 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	SLC4A7	Q9Y6M7	1214 aa		10.85	□□□□□ -0.67
GRINA-208	ENST00000533044	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	OPLAH	O14841	1288 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	DDAH1	O94760	285 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	BAIAP3	O94812	1187 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	MMP3	P08254	477 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	POLR2M	P0CAP2	368 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	GNAQ	P50148	359 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	CCL23	P55773	120 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	PTH1R	Q03431	593 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	FAM47C	Q5HY64	1035 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	XRRA1	Q6P2D8	792 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	SEPT14	Q6ZU15	432 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	AFG1L	Q8WV93	481 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	TMEM87B	Q96K49	555 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	SPZ1	Q9BXG8	430 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	NOD1	Q9Y239	953 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	PCDHA11	Q9Y5I1	949 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	MRVI1	Q9Y6F6	885 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	UMODL1	Q5DID0	1318 aa		10.84	□□□□□ -0.67
GRINA-208	ENST00000533044	PPP1R11	O60927	126 aa	Predicted RBP	10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	F2	P00734	622 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	CALM1	P0DP23	149 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	CALM2	P0DP24	149 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	CALM3	P0DP25	149 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	EIF2AK2	P19525	551 aa	Known RBP	10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	CCND2	P30279	289 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	LIFR	P42702	1097 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	ADGRE1	Q14246	886 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	PGM5	Q15124	567 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	GNPTAB	Q3T906	1256 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	TMEM67	Q5HYA8	995 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	CTCFL	Q8NI51	663 aa	Predicted RBP	10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	IGDCC4	Q8TDY8	1250 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	PPM1E	Q8WY54	764 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	KAT2B	Q92831	832 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	COPS5	Q92905	334 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	SLC9A7	Q96T83	725 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	GAS2L1	Q99501	681 aa	Predicted RBP	10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	PRDM12	Q9H4Q4	367 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	SLC28A3	Q9HAS3	691 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	FRMPD4	Q14CM0	1322 aa		10.83	□□□□□ -0.68
GRINA-208	ENST00000533044	HAS3	O00219	553 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	PIK3CD	O00329	1044 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	CYTH3	O43739	400 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	EFCAB14	O75071	495 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	IQCF3	P0C7M6	154 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	CYP2C9	P11712	490 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	ATP2A2	P16615	1042 aa	Known RBP	10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	ICAM3	P32942	547 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	MCM5	P33992	734 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	PTGIS	Q16647	500 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	LY6K	Q17RY6	165 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	CELF3	Q5SZQ8	465 aa	Known RBP	10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	MYSM1	Q5VVJ2	828 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	CASC1	Q6TDU7	716 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	OTOP2	Q7RTS6	562 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	DHX37	Q8IY37	1157 aa	Known RBP	10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	SYMPK	Q92797	1274 aa	Known RBP	10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	VWCE	Q96DN2	955 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	PIGS	Q96S52	555 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	GTF2IRD1	Q9UHL9	959 aa		10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	RBM8A	Q9Y5S9	174 aa	Known RBP	10.82	□□□□□ -0.68
GRINA-208	ENST00000533044	RGS20	O76081	388 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	SELP	P16109	830 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	POU3F3	P20264	500 aa	Predicted RBP	10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	ANTXR2	P58335	489 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	PTK7	Q13308	1070 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	NEDD9	Q14511	834 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	SLC35G1	Q2M3R5	365 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	BMP2KL	Q5H9B9	411 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	TJAP1	Q5JTD0	557 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	HOMER1	Q86YM7	354 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	ZNF654	Q8IZM8	581 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	C7orf31	Q8N865	590 aa		10.81	□□□□□ -0.68
GRINA-208	ENST00000533044	RRP36	Q96EU6	259 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms