RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PORCNQ9H237 461 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 R3HDMLQ9H3Y0 253 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 TMEM134Q9H6X4 195 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 EFCC1Q9HA90 598 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 SLC15A5A6NIM6 579 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 M0R2N6 131 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 NFIBO00712 420 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 MEIS2O14770 477 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 FCGRTP55899 365 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 GRB14Q14449 540 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 KCTD2Q14681 263 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 KIF22Q14807 665 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 ARHGEF6Q15052 776 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 NPY5RQ15761 445 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 RNF207Q6ZRF8 634 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 BLIDQ8IZY5 108 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 NLRP7Q8WX94 980 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 ERO1AQ96HE7 468 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 MMP19Q99542 508 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 A1CFQ9NQ94 594 aaKnown RBP14.33□□□□□ -0.12
COPB1-208ENST00000532088 CYP39A1Q9NYL5 469 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 IVNS1ABPQ9Y6Y0 642 aa14.33□□□□□ -0.12
COPB1-208ENST00000532088 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 H3BQV1 296 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 PEX10O60683 326 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 FKTNO75072 461 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 CFBP00751 764 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 SYT1P21579 422 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 CLCN1P35523 988 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 DDIT3P35638 169 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 KRT2P35908 639 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 RPS6P62753 249 aaKnown RBP14.32□□□□□ -0.12
COPB1-208ENST00000532088 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
COPB1-208ENST00000532088 IFFO2Q5TF58 517 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 REXO1Q8N1G1 1221 aaKnown RBP14.32□□□□□ -0.12
COPB1-208ENST00000532088 ANKRD35Q8N283 1001 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 DNERQ8NFT8 737 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 ZFRQ96KR1 1074 aaKnown RBP14.32□□□□□ -0.12
COPB1-208ENST00000532088 FOXP1Q9H334 677 aaPredicted RBP14.32□□□□□ -0.12
COPB1-208ENST00000532088 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
COPB1-208ENST00000532088 DIS3Q9Y2L1 958 aaKnown RBP14.32□□□□□ -0.12
COPB1-208ENST00000532088 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 STX6O43752 255 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 TAL1P17542 331 aaPredicted RBP14.31□□□□□ -0.12
COPB1-208ENST00000532088 SLC4A3P48751 1232 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 BAATQ14032 418 aaPredicted RBP14.31□□□□□ -0.12
COPB1-208ENST00000532088 MORN1Q5T089 497 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 PARP9Q8IXQ6 854 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 DIS3L2Q8IYB7 885 aaKnown RBP14.31□□□□□ -0.12
COPB1-208ENST00000532088 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
COPB1-208ENST00000532088 EHMT1Q9H9B1 1298 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 SLC5A4Q9NY91 659 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 KCNJ14Q9UNX9 436 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 FRMPD4Q14CM0 1322 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 PLXNB2O15031 1838 aa14.31□□□□□ -0.12
COPB1-208ENST00000532088 MGAMO43451 1857 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 TNPO2O14787 897 aaKnown RBP14.3□□□□□ -0.12
COPB1-208ENST00000532088 DTNBO60941 627 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 HOXC6P09630 235 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 U2AF2P26368 475 aaKnown RBP eCLIP14.3□□□□□ -0.12
COPB1-208ENST00000532088 HOXD10P28358 340 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 PSMC4P43686 418 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 PRMT2P55345 433 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 NSMFQ6X4W1 530 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 KRT25Q7Z3Z0 450 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 MSL3Q8N5Y2 521 aaKnown RBP14.3□□□□□ -0.12
COPB1-208ENST00000532088 FAM133AQ8N9E0 248 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 USP6NLQ92738 828 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 TNFRSF25Q93038 417 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 REPIN1Q9BWE0 567 aaKnown RBP14.3□□□□□ -0.12
COPB1-208ENST00000532088 GJB4Q9NTQ9 266 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 ADD3Q9UEY8 706 aaKnown RBP14.3□□□□□ -0.12
COPB1-208ENST00000532088 PCDHA6Q9UN73 950 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 MTMR6Q9Y217 621 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 PCDHA8Q9Y5H6 950 aa14.3□□□□□ -0.12
COPB1-208ENST00000532088 SPDYE3A6NKU9 549 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 B4DLN1 442 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 ADORA2AP29274 412 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 NUCB2P80303 420 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 WDR78Q5VTH9 848 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 XRRA1Q6P2D8 792 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 USP17L6PQ6QN14 398 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 SLC30A10Q6XR72 485 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 ZNF296Q8WUU4 475 aaPredicted RBP14.29□□□□□ -0.12
COPB1-208ENST00000532088 TBC1D5Q92609 795 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 IWS1Q96ST2 819 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 NUDT12Q9BQG2 462 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
COPB1-208ENST00000532088 GJD2Q9UKL4 321 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 RPTORQ8N122 1335 aa14.29□□□□□ -0.12
COPB1-208ENST00000532088 BTBD18B2RXH4 712 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 XRCC5P13010 732 aaKnown RBP14.28□□□□□ -0.12
COPB1-208ENST00000532088 CTGFP29279 349 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 RGS2P41220 211 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 GUCY1B3Q02153 619 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 IRF5Q13568 498 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 UBE2SQ16763 222 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 ZNF792Q3KQV3 632 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 BRAPQ7Z569 592 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms