RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 HOXD8P13378 290 aaPredicted RBP9.9□□□□□ -0.82
CHD7-206ENST00000527900 COL9A3Q14050 684 aaPredicted RBP9.9□□□□□ -0.82
CHD7-206ENST00000527900 SESTD1Q86VW0 696 aa9.9□□□□□ -0.82
CHD7-206ENST00000527900 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHD7-206ENST00000527900 MB21D2Q8IYB1 491 aaPredicted RBP9.9□□□□□ -0.82
CHD7-206ENST00000527900 MAFAQ8NHW3 353 aaPredicted RBP9.9□□□□□ -0.82
CHD7-206ENST00000527900 PPP1R13LQ8WUF5 828 aa9.9□□□□□ -0.82
CHD7-206ENST00000527900 AFG1LQ8WV93 481 aa9.9□□□□□ -0.82
CHD7-206ENST00000527900 SCLYQ96I15 445 aa9.9□□□□□ -0.82
CHD7-206ENST00000527900 PDCD2LQ9BRP1 358 aa9.9□□□□□ -0.82
CHD7-206ENST00000527900 SPTBN5Q9NRC6 3674 aaKnown RBP9.89□□□□□ -0.83
CHD7-206ENST00000527900 HAS3O00219 553 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 PITPNM1O00562 1244 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 IFIT3O14879 490 aaKnown RBP9.89□□□□□ -0.83
CHD7-206ENST00000527900 CFBP00751 764 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 GH1P01241 217 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 MMP3P08254 477 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 EIF2AK2P19525 551 aaKnown RBP9.89□□□□□ -0.83
CHD7-206ENST00000527900 TRDNQ13061 729 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 GPNMBQ14956 572 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 BRDTQ58F21 947 aaPredicted RBP9.89□□□□□ -0.83
CHD7-206ENST00000527900 ARHGEF16Q5VV41 709 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 SEPT14Q6ZU15 432 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 CHST3Q7LGC8 479 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 OTOP2Q7RTS6 562 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 VSIG10LQ86VR7 867 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 RPUSD2Q8IZ73 545 aaKnown RBP9.89□□□□□ -0.83
CHD7-206ENST00000527900 NCOA7Q8NI08 942 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 PIGSQ96S52 555 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 MAP3K14Q99558 947 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 GPHNQ9NQX3 736 aaPredicted RBP9.89□□□□□ -0.83
CHD7-206ENST00000527900 YBX2Q9Y2T7 364 aaKnown RBP9.89□□□□□ -0.83
CHD7-206ENST00000527900 PCDHA1Q9Y5I3 950 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 TANC1Q9C0D5 1861 aa9.89□□□□□ -0.83
CHD7-206ENST00000527900 PNMA6FA0A0J9YX94 578 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 DHX16O60231 1041 aaKnown RBP9.88□□□□□ -0.83
CHD7-206ENST00000527900 PFKMP08237 780 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 IQCF3P0C7M6 154 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 FOSL2P15408 326 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 RBL2Q08999 1139 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 WTAPQ15007 396 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 PGM5Q15124 567 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 MYSM1Q5VVJ2 828 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
CHD7-206ENST00000527900 IL31RAQ8NI17 732 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 MTA3Q9BTC8 594 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 COL25A1Q9BXS0 654 aaPredicted RBP9.88□□□□□ -0.83
CHD7-206ENST00000527900 LSG1Q9H089 658 aaKnown RBP9.88□□□□□ -0.83
CHD7-206ENST00000527900 LY9Q9HBG7 655 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 RBM8AQ9Y5S9 174 aaKnown RBP9.88□□□□□ -0.83
CHD7-206ENST00000527900 MUC3AQ02505 3323 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 PTPRSQ13332 1948 aa9.88□□□□□ -0.83
CHD7-206ENST00000527900 FRMPD4Q14CM0 1322 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 TGFB3P10600 412 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 CASTP20810 708 aaKnown RBP9.87□□□□□ -0.83
CHD7-206ENST00000527900 SMARCA1P28370 1054 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 HOXA13P31271 388 aaPredicted RBP9.87□□□□□ -0.83
CHD7-206ENST00000527900 RFC2P35250 354 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 SP2Q02086 613 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 LAMC2Q13753 1193 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 ADGRE1Q14246 886 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 NECTIN1Q15223 517 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 RAB30Q15771 203 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 DGKDQ16760 1214 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 CELF3Q5SZQ8 465 aaKnown RBP9.87□□□□□ -0.83
CHD7-206ENST00000527900 USP38Q8NB14 1042 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 PPTC7Q8NI37 304 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 DHX38Q92620 1227 aaKnown RBP9.87□□□□□ -0.83
CHD7-206ENST00000527900 MTIF3Q9H2K0 278 aaKnown RBP9.87□□□□□ -0.83
CHD7-206ENST00000527900 GTF2IRD1Q9UHL9 959 aa9.87□□□□□ -0.83
CHD7-206ENST00000527900 TRANK1O15050 2925 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 ERICH2A1L162 156 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 GCOM1H8Y6P7 765 aaPredicted RBP9.86□□□□□ -0.83
CHD7-206ENST00000527900 PPFIA4O75335 1185 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 F2P00734 622 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 POLR2MP0CAP2 368 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 RABGGTBP53611 331 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 MRPS9P82933 396 aaKnown RBP9.86□□□□□ -0.83
CHD7-206ENST00000527900 TRAF1Q13077 416 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 HIC1Q14526 733 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 PTGISQ16647 500 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 TRIM71Q2Q1W2 868 aaKnown RBP9.86□□□□□ -0.83
CHD7-206ENST00000527900 HSDL1Q3SXM5 330 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 FAM47CQ5HY64 1035 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 TMEM67Q5HYA8 995 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 KCNV1Q6PIU1 500 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 TRAF7Q6Q0C0 670 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 RALYLQ86SE5 291 aaKnown RBP9.86□□□□□ -0.83
CHD7-206ENST00000527900 HOMER1Q86YM7 354 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 GPKOWQ92917 476 aaPredicted RBP eCLIP9.86□□□□□ -0.83
CHD7-206ENST00000527900 ESYT1Q9BSJ8 1104 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 SPZ1Q9BXG8 430 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 NKX2-4Q9H2Z4 354 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 PRDM12Q9H4Q4 367 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 BCAS3Q9H6U6 928 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 HDAC6Q9UBN7 1215 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 MSRAQ9UJ68 235 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 PCDHA11Q9Y5I1 949 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 MRVI1Q9Y6F6 885 aa9.86□□□□□ -0.83
CHD7-206ENST00000527900 SLC4A7Q9Y6M7 1214 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms