RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 DIS3L2Q8IYB7 885 aaKnown RBP8.08□□□□□ -1.12
VPS11-201ENST00000524454 ENGASEQ8NFI3 743 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 CCDC12Q8WUD4 166 aaPredicted RBP8.08□□□□□ -1.12
VPS11-201ENST00000524454 TRIB2Q92519 343 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 KIFC2Q96AC6 838 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 SHISA4Q96DD7 197 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 PGBD1Q96JS3 809 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 PPP1R9BQ96SB3 815 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 NUDT12Q9BQG2 462 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 FUCA2Q9BTY2 467 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 RNF208Q9H0X6 261 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 FLRT1Q9NZU1 646 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 STX8Q9UNK0 236 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 ZNF236Q9UL36 1845 aa8.08□□□□□ -1.12
VPS11-201ENST00000524454 TNRC18O15417 2968 aaPredicted RBP8.07□□□□□ -1.12
VPS11-201ENST00000524454 BRCA2P51587 3418 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 ESYT2A0FGR8 921 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 PALM3A6NDB9 673 aaPredicted RBP8.07□□□□□ -1.12
VPS11-201ENST00000524454 KINO60870 393 aaKnown RBP8.07□□□□□ -1.12
VPS11-201ENST00000524454 CUTAO60888 179 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 SNHG28P0DPA3 235 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 SCG2P13521 617 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 TAL1P17542 331 aaPredicted RBP8.07□□□□□ -1.12
VPS11-201ENST00000524454 ERCC3P19447 782 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 KRT2P35908 639 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 ME1P48163 572 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 PRSS12P56730 875 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 UBXN2AP68543 259 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 IRF5Q13568 498 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 PKN1Q16512 942 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 ASPRV1Q53RT3 343 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 MORN1Q5T089 497 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 PPP1R18Q6NYC8 613 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 KCTD1Q719H9 257 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 GPIHBP1Q8IV16 184 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 SPNS2Q8IVW8 549 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 NPLOC4Q8TAT6 608 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 BICD2Q8TD16 824 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 GTF3C2Q8WUA4 911 aaPredicted RBP8.07□□□□□ -1.12
VPS11-201ENST00000524454 NUP133Q8WUM0 1156 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 CHAMP1Q96JM3 812 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 PDLIM2Q96JY6 352 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 SLF1Q9BQI6 1058 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 PYM1Q9BRP8 204 aaKnown RBP8.07□□□□□ -1.12
VPS11-201ENST00000524454 MYL10Q9BUA6 226 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 SPATC1LQ9H0A9 340 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 TNMDQ9H2S6 317 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 HOXC10Q9NYD6 342 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 DACT1Q9NYF0 836 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 PPP1R9AQ9ULJ8 1098 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 NOL7Q9UMY1 257 aaKnown RBP8.07□□□□□ -1.12
VPS11-201ENST00000524454 MYH6P13533 1939 aa8.07□□□□□ -1.12
VPS11-201ENST00000524454 FRMPD2Q68DX3 1309 aaPredicted RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 KIF28PB7ZC32 967 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 TMEM232C9JQI7 657 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 BHMG1C9JSJ3 638 aaPredicted RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 VWA5AO00534 786 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 HMGCRP04035 888 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 PGK2P07205 417 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 RXRAP19793 462 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 CCND3P30281 292 aaPredicted RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 RGS2P41220 211 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 CCNA1P78396 465 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 IKQ13123 557 aaPredicted RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 MAP2K5Q13163 448 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 PTPAQ15257 358 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 SF3A1Q15459 793 aaKnown RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 CCDC96Q2M329 555 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 FOXD4L6Q3SYB3 417 aaPredicted RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 AXDND1Q5T1B0 1012 aaPredicted RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 GPATCH4Q5T3I0 446 aaKnown RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 FAM173BQ6P4H8 233 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 PADI6Q6TGC4 694 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 FOXD4L3Q6VB84 417 aaPredicted RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 FMR1NBQ8N0W7 255 aaPredicted RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 CPXCR1Q8N123 301 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 REPS2Q8NFH8 660 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 PXYLP1Q8TE99 480 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 SOCS4Q8WXH5 440 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 USP6NLQ92738 828 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 TNFRSF25Q93038 417 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 MKL1Q969V6 931 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 FERMT2Q96AC1 680 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 CCDC34Q96HJ3 373 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 DEFB118Q96PH6 123 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 TMEM47Q9BQJ4 181 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 GLT8D2Q9H1C3 349 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 RAVER2Q9HCJ3 691 aaKnown RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
VPS11-201ENST00000524454 MAD2L2Q9UI95 211 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 SMCHD1A6NHR9 2005 aa8.06□□□□□ -1.12
VPS11-201ENST00000524454 ALPK3Q96L96 1907 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 SLC15A5A6NIM6 579 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 LAD1O00515 517 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 COBLO75128 1261 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 NR1I2O75469 434 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 PARP1P09874 1014 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 BMP3P12645 472 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 LIG1P18858 919 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms