RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 GCOM1H8Y6P7 765 aaPredicted RBP18.33■□□□□ 0.53
CLN8-205ENST00000520991 PRC1O43663 620 aa18.33■□□□□ 0.53
CLN8-205ENST00000520991 CYTH3O43739 400 aa18.33■□□□□ 0.53
CLN8-205ENST00000520991 POLR2MP0CAP2 368 aa18.33■□□□□ 0.53
CLN8-205ENST00000520991 PTPN11Q06124 597 aaPredicted RBP18.33■□□□□ 0.53
CLN8-205ENST00000520991 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.53
CLN8-205ENST00000520991 OTOP2Q7RTS6 562 aa18.33■□□□□ 0.53
CLN8-205ENST00000520991 ZNF654Q8IZM8 581 aa18.33■□□□□ 0.53
CLN8-205ENST00000520991 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.53
CLN8-205ENST00000520991 PIBF1Q8WXW3 757 aa18.33■□□□□ 0.53
CLN8-205ENST00000520991 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.53
CLN8-205ENST00000520991 LY9Q9HBG7 655 aa18.33■□□□□ 0.53
CLN8-205ENST00000520991 DDX41Q9UJV9 622 aaKnown RBP18.33■□□□□ 0.53
CLN8-205ENST00000520991 GRXCR1A8MXD5 290 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 DDAH1O94760 285 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 FOSL2P15408 326 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 CASTP20810 708 aaKnown RBP18.32■□□□□ 0.52
CLN8-205ENST00000520991 KIF5BP33176 963 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 MCM5P33992 734 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 DGKDQ16760 1214 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
CLN8-205ENST00000520991 FCHSD1Q86WN1 690 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 DHX37Q8IY37 1157 aaKnown RBP18.32■□□□□ 0.52
CLN8-205ENST00000520991 MYL10Q9BUA6 226 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 PBX4Q9BYU1 374 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 ANO2Q9NQ90 1003 aa18.32■□□□□ 0.52
CLN8-205ENST00000520991 CXXC1Q9P0U4 656 aaPredicted RBP18.32■□□□□ 0.52
CLN8-205ENST00000520991 CCDC69A6NI79 296 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 SLC27A2O14975 620 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 CCND2P30279 289 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 PBX2P40425 430 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 LAMC2Q13753 1193 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 PGM5Q15124 567 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 KCNV1Q6PIU1 500 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 RETREG2Q8NC44 543 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 MAFAQ8NHW3 353 aaPredicted RBP18.31■□□□□ 0.52
CLN8-205ENST00000520991 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
CLN8-205ENST00000520991 MAP3K14Q99558 947 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 MTA3Q9BTC8 594 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 ZNF576Q9H609 170 aa18.31■□□□□ 0.52
CLN8-205ENST00000520991 BAZ2BQ9UIF8 2168 aaKnown RBP18.3■□□□□ 0.52
CLN8-205ENST00000520991 ZBBXA8MT70 800 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 PFKMP08237 780 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 BFSP2Q13515 415 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 RAB30Q15771 203 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 BMP2KLQ5H9B9 411 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 DEFB128Q7Z7B8 93 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 VSIG10LQ86VR7 867 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 IL31RAQ8NI17 732 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 PPTC7Q8NI37 304 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 RRP36Q96EU6 259 aaKnown RBP18.3■□□□□ 0.52
CLN8-205ENST00000520991 TMEM87BQ96K49 555 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 SPZ1Q9BXG8 430 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 SEC63Q9UGP8 760 aaKnown RBP18.3■□□□□ 0.52
CLN8-205ENST00000520991 MSRAQ9UJ68 235 aa18.3■□□□□ 0.52
CLN8-205ENST00000520991 DLL1O00548 723 aa18.29■□□□□ 0.52
CLN8-205ENST00000520991 PITPNM1O00562 1244 aa18.29■□□□□ 0.52
CLN8-205ENST00000520991 SH2B2O14492 632 aaPredicted RBP18.29■□□□□ 0.52
CLN8-205ENST00000520991 GNAQP50148 359 aa18.29■□□□□ 0.52
CLN8-205ENST00000520991 GRIN2CQ14957 1233 aa18.29■□□□□ 0.52
CLN8-205ENST00000520991 PTGISQ16647 500 aa18.29■□□□□ 0.52
CLN8-205ENST00000520991 LZTS2Q9BRK4 669 aa18.29■□□□□ 0.52
CLN8-205ENST00000520991 KATNAL1Q9BW62 490 aa18.29■□□□□ 0.52
CLN8-205ENST00000520991 SLC4A7Q9Y6M7 1214 aa18.29■□□□□ 0.52
CLN8-205ENST00000520991 SORBS3O60504 671 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 ZNF286BP0CG31 522 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 RFC2P35250 354 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 NECTIN1Q15223 517 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLN8-205ENST00000520991 CCDC155Q8N6L0 562 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 C7orf31Q8N865 590 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 KAT2BQ92831 832 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 CUL5Q93034 780 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 SPATA33Q96N06 139 aa18.28■□□□□ 0.52
CLN8-205ENST00000520991 RGS20O76081 388 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 GGPS1O95749 300 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 CALM1P0DP23 149 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 CALM2P0DP24 149 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 CALM3P0DP25 149 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 TGFB3P10600 412 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 ACTN1P12814 892 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 SMARCA1P28370 1054 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 PSEN2P49810 448 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 GNPTABQ3T906 1256 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 CELF3Q5SZQ8 465 aaKnown RBP18.27■□□□□ 0.52
CLN8-205ENST00000520991 RNF20Q5VTR2 975 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 GDF6Q6KF10 455 aaPredicted RBP18.27■□□□□ 0.52
CLN8-205ENST00000520991 SESTD1Q86VW0 696 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 SMARCC2Q8TAQ2 1214 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
CLN8-205ENST00000520991 ALG1Q9BT22 464 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 SLC12A7Q9Y666 1083 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 PRUNE2Q8WUY3 3088 aa18.27■□□□□ 0.52
CLN8-205ENST00000520991 PLEKHA8P1O95397 391 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 F2P00734 622 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 IQCF3P0C7M6 154 aa18.26■□□□□ 0.51
CLN8-205ENST00000520991 RXRAP19793 462 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms