RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 LY6KQ17RY6 165 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 FAM47CQ5HY64 1035 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 SYNE3Q6ZMZ3 975 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 NFXL1Q6ZNB6 911 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 HOMER1Q86YM7 354 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 DHX37Q8IY37 1157 aaKnown RBP8.45□□□□□ -1.06
HTT-212ENST00000513639 AFG1LQ8WV93 481 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 HERVK_113Q902F9 699 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 EMID1Q96A84 441 aaPredicted RBP8.45□□□□□ -1.06
HTT-212ENST00000513639 RRP36Q96EU6 259 aaKnown RBP8.45□□□□□ -1.06
HTT-212ENST00000513639 FAM161BQ96MY7 647 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 PIGSQ96S52 555 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 CDX2Q99626 313 aaPredicted RBP8.45□□□□□ -1.06
HTT-212ENST00000513639 NOC4LQ9BVI4 516 aaKnown RBP8.45□□□□□ -1.06
HTT-212ENST00000513639 PPP1R12CQ9BZL4 782 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 PXMP2Q9NR77 195 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 MSRAQ9UJ68 235 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 NOD1Q9Y239 953 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 MRVI1Q9Y6F6 885 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 PITPNM1O00562 1244 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 PRC1O43663 620 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 DDAH1O94760 285 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 PARNO95453 639 aaKnown RBP8.44□□□□□ -1.06
HTT-212ENST00000513639 ACRP10323 421 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 MYCLP12524 364 aaPredicted RBP8.44□□□□□ -1.06
HTT-212ENST00000513639 ACTN1P12814 892 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 CCND2P30279 289 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 CCL23P55773 120 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 GSE1Q14687 1217 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 GNPTABQ3T906 1256 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 BMP2KLQ5H9B9 411 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 RASIP1Q5U651 963 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 XRRA1Q6P2D8 792 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 CHST3Q7LGC8 479 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 MB21D2Q8IYB1 491 aaPredicted RBP8.44□□□□□ -1.06
HTT-212ENST00000513639 CCDC155Q8N6L0 562 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 PPTC7Q8NI37 304 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 COPS5Q92905 334 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 CUL5Q93034 780 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 TIFAQ96CG3 184 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 PDCD2LQ9BRP1 358 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 ESYT1Q9BSJ8 1104 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 KATNAL1Q9BW62 490 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 SPZ1Q9BXG8 430 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 LSG1Q9H089 658 aaKnown RBP8.44□□□□□ -1.06
HTT-212ENST00000513639 ANO2Q9NQ90 1003 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 TRMT13Q9NUP7 481 aaKnown RBP8.44□□□□□ -1.06
HTT-212ENST00000513639 COL20A1Q9P218 1284 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 SEC63Q9UGP8 760 aaKnown RBP8.44□□□□□ -1.06
HTT-212ENST00000513639 SLC12A7Q9Y666 1083 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 SLC4A7Q9Y6M7 1214 aa8.44□□□□□ -1.06
HTT-212ENST00000513639 FRMPD3Q5JV73 1810 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 PPP1R11O60927 126 aaPredicted RBP8.43□□□□□ -1.06
HTT-212ENST00000513639 ARIH2O95376 493 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 PTGS1P23219 599 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 DNAJB2P25686 324 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 HOXA13P31271 388 aaPredicted RBP8.43□□□□□ -1.06
HTT-212ENST00000513639 CHMP4BP1P59074 171 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 ARHGAP1Q07960 439 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 NECTIN1Q15223 517 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 RAB30Q15771 203 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 PTGISQ16647 500 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 CELF3Q5SZQ8 465 aaKnown RBP8.43□□□□□ -1.06
HTT-212ENST00000513639 MYSM1Q5VVJ2 828 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 CREB3L3Q68CJ9 461 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 SESTD1Q86VW0 696 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 FCHSD1Q86WN1 690 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 TEX2Q8IWB9 1127 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 ZNF654Q8IZM8 581 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 C7orf31Q8N865 590 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 FANCBQ8NB91 859 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 GUCD1Q96NT3 240 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 ZNF576Q9H609 170 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 MLXIPQ9HAP2 919 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 LY9Q9HBG7 655 aa8.43□□□□□ -1.06
HTT-212ENST00000513639 MCM3APO60318 1980 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 PIK3CDO00329 1044 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 DLL1O00548 723 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 OPLAHO14841 1288 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 SLC27A2O14975 620 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 CYTH3O43739 400 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 MMP3P08254 477 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 HMGB1P09429 215 aaKnown RBP8.42□□□□□ -1.06
HTT-212ENST00000513639 IQCF3P0C7M6 154 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 CYP2C9P11712 490 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 ANTXR2P58335 489 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 NEDD9Q14511 834 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 KRT32Q14532 448 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 PGM5Q15124 567 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 TSGA10IPQ3SY00 556 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 OTOP2Q7RTS6 562 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 GIMAP8Q8ND71 665 aaPredicted RBP8.42□□□□□ -1.06
HTT-212ENST00000513639 SMARCC2Q8TAQ2 1214 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 CAGE1Q8TC20 777 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 PHOSPHO2Q8TCD6 241 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 SPATA33Q96N06 139 aa8.42□□□□□ -1.06
HTT-212ENST00000513639 FTOQ9C0B1 505 aaKnown RBP eCLIP8.42□□□□□ -1.06
HTT-212ENST00000513639 TTYH1Q9H313 450 aaPredicted RBP8.42□□□□□ -1.06
HTT-212ENST00000513639 PSTPIP2Q9H939 334 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms