RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 FAM184AQ8NB25 1140 aa18.84■□□□□ 0.61
HMGCL-209ENST00000513148 ZFP91Q96JP5 570 aaPredicted RBP18.84■□□□□ 0.61
HMGCL-209ENST00000513148 PDCD2LQ9BRP1 358 aa18.84■□□□□ 0.61
HMGCL-209ENST00000513148 RPTORQ8N122 1335 aa18.84■□□□□ 0.61
HMGCL-209ENST00000513148 PGM5Q15124 567 aa18.83■□□□□ 0.61
HMGCL-209ENST00000513148 CSPP1Q1MSJ5 1256 aa18.83■□□□□ 0.61
HMGCL-209ENST00000513148 REXO1Q8N1G1 1221 aaKnown RBP18.83■□□□□ 0.61
HMGCL-209ENST00000513148 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.83■□□□□ 0.61
HMGCL-209ENST00000513148 GLT8D2Q9H1C3 349 aa18.83■□□□□ 0.61
HMGCL-209ENST00000513148 PCDHA6Q9UN73 950 aa18.83■□□□□ 0.61
HMGCL-209ENST00000513148 PCDHA8Q9Y5H6 950 aa18.83■□□□□ 0.61
HMGCL-209ENST00000513148 NR3C2P08235 984 aa18.83■□□□□ 0.6
HMGCL-209ENST00000513148 EDNRBP24530 442 aa18.83■□□□□ 0.6
HMGCL-209ENST00000513148 ACVR2BQ13705 512 aa18.83■□□□□ 0.6
HMGCL-209ENST00000513148 ANO1Q5XXA6 986 aa18.83■□□□□ 0.6
HMGCL-209ENST00000513148 ABHD16BQ9H3Z7 469 aa18.83■□□□□ 0.6
HMGCL-209ENST00000513148 B4DLN1 442 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 ZNF865P0CJ78 1059 aaPredicted RBP18.82■□□□□ 0.6
HMGCL-209ENST00000513148 NASPP49321 788 aaPredicted RBP18.82■□□□□ 0.6
HMGCL-209ENST00000513148 CLK2P49760 499 aaKnown RBP18.82■□□□□ 0.6
HMGCL-209ENST00000513148 GUCY1B3Q02153 619 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 TRIM29Q14134 588 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 BICD2Q8TD16 824 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 MORC4Q8TE76 937 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 TNPO1Q92973 898 aaKnown RBP18.82■□□□□ 0.6
HMGCL-209ENST00000513148 IWS1Q96ST2 819 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 PHF20Q9BVI0 1012 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 ANO3Q9BYT9 981 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 NOL7Q9UMY1 257 aaKnown RBP18.82■□□□□ 0.6
HMGCL-209ENST00000513148 PCDHA4Q9UN74 947 aa18.82■□□□□ 0.6
HMGCL-209ENST00000513148 CCDC85CA6NKD9 419 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 RBM10P98175 930 aaKnown RBP18.81■□□□□ 0.6
HMGCL-209ENST00000513148 KATNBL1Q9H079 304 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 PDGFCQ9NRA1 345 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 SMC3Q9UQE7 1217 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.81■□□□□ 0.6
HMGCL-209ENST00000513148 LOC102724159A0A0B4J2E5 919 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 GJB2P29033 226 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 CCND2P30279 289 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 PWP2Q15269 919 aaKnown RBP18.81■□□□□ 0.6
HMGCL-209ENST00000513148 NPY5RQ15761 445 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 STXBP2Q15833 593 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 BLIDQ8IZY5 108 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 LENG1Q96BZ8 264 aaPredicted RBP18.81■□□□□ 0.6
HMGCL-209ENST00000513148 C8orf76Q96K31 380 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 DEFB118Q96PH6 123 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 FRMPD4Q14CM0 1322 aa18.81■□□□□ 0.6
HMGCL-209ENST00000513148 FRMPD3Q5JV73 1810 aa18.8■□□□□ 0.6
HMGCL-209ENST00000513148 KIAA1217Q5T5P2 1943 aa18.8■□□□□ 0.6
HMGCL-209ENST00000513148 NCLP19338 710 aaKnown RBP18.8■□□□□ 0.6
HMGCL-209ENST00000513148 AP3B2Q13367 1082 aa18.8■□□□□ 0.6
HMGCL-209ENST00000513148 CUL4AQ13619 759 aa18.8■□□□□ 0.6
HMGCL-209ENST00000513148 CCDC144BQ3MJ40 725 aa18.8■□□□□ 0.6
HMGCL-209ENST00000513148 TMEM106CQ9BVX2 250 aa18.8■□□□□ 0.6
HMGCL-209ENST00000513148 SEPT4O43236 478 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 ADCYAP1R1P41586 468 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 KLHL40Q2TBA0 621 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 KRT40Q6A162 431 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 SEPT14Q6ZU15 432 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 EHMT1Q9H9B1 1298 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 VTA1Q9NP79 307 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 PAK6Q9NQU5 681 aaPredicted RBP18.79■□□□□ 0.6
HMGCL-209ENST00000513148 RTEL1Q9NZ71 1219 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 NRBP1Q9UHY1 535 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.79■□□□□ 0.6
HMGCL-209ENST00000513148 GOLGA6L22H0YM25 854 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 FOSP01100 380 aaPredicted RBP18.79■□□□□ 0.6
HMGCL-209ENST00000513148 AKR1A1P14550 325 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 ZNF445P59923 1031 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 VSIG10LQ86VR7 867 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 OXER1Q8TDS5 423 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 DDX20Q9UHI6 824 aaKnown RBP18.79■□□□□ 0.6
HMGCL-209ENST00000513148 MYH7BA7E2Y1 1941 aa18.79■□□□□ 0.6
HMGCL-209ENST00000513148 ADCY6O43306 1168 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 PTGS1P23219 599 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 MRPS9P82933 396 aaKnown RBP18.78■□□□□ 0.6
HMGCL-209ENST00000513148 GALNT17Q6IS24 598 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 FAM177A1Q8N128 213 aaPredicted RBP18.78■□□□□ 0.6
HMGCL-209ENST00000513148 DAGLBQ8NCG7 672 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 EIF3JO75822 258 aaKnown RBP18.78■□□□□ 0.6
HMGCL-209ENST00000513148 MMP1P03956 469 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 SOX10P56693 466 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 TMEM63BQ5T3F8 832 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 PCNX4Q63HM2 1172 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 TEX2Q8IWB9 1127 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 BRMS1Q9HCU9 246 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 FAM184BQ9ULE4 1060 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 KIF3AQ9Y496 699 aa18.78■□□□□ 0.6
HMGCL-209ENST00000513148 MYCNP04198 464 aaPredicted RBP18.77■□□□□ 0.6
HMGCL-209ENST00000513148 KRT2P35908 639 aa18.77■□□□□ 0.6
HMGCL-209ENST00000513148 NR5A1Q13285 461 aa18.77■□□□□ 0.6
HMGCL-209ENST00000513148 GJC2Q5T442 439 aaPredicted RBP18.77■□□□□ 0.6
HMGCL-209ENST00000513148 U2AF1L4Q8WU68 220 aaKnown RBP18.77■□□□□ 0.6
HMGCL-209ENST00000513148 PDLIM2Q96JY6 352 aa18.77■□□□□ 0.6
HMGCL-209ENST00000513148 POTEFA5A3E0 1075 aa18.76■□□□□ 0.59
HMGCL-209ENST00000513148 M0R2N6 131 aa18.76■□□□□ 0.59
HMGCL-209ENST00000513148 GJB1P08034 283 aa18.76■□□□□ 0.59
HMGCL-209ENST00000513148 SREBF1P36956 1147 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms