RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 DNERQ8NFT8 737 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 IL31RAQ8NI17 732 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 SCFD2Q8WU76 684 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 RUFY2Q8WXA3 655 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 SCLYQ96I15 445 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 MYL10Q9BUA6 226 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 PCDHA11Q9Y5I1 949 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 NCOR1O75376 2440 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 KPNA6O60684 536 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 CYP2C9P11712 490 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 ACTN1P12814 892 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 RFC2P35250 354 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 RABGGTBP53611 331 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 FAM47CQ5HY64 1035 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 NFRKBQ6P4R8 1299 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 IL27Q8NEV9 243 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 ZFP91Q96JP5 570 aaPredicted RBP12.69□□□□□ -0.38
RNF4-212ENST00000509258 ASB2Q96Q27 587 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 PIGSQ96S52 555 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
RNF4-212ENST00000509258 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
RNF4-212ENST00000509258 REV3LO60673 3130 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 A6NJR5 290 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 SLC27A2O14975 620 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 RGS20O76081 388 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 EIF2AK2P19525 551 aaKnown RBP12.68□□□□□ -0.38
RNF4-212ENST00000509258 HOXA13P31271 388 aaPredicted RBP12.68□□□□□ -0.38
RNF4-212ENST00000509258 HSD17B4P51659 736 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 MRPS5P82675 430 aaKnown RBP12.68□□□□□ -0.38
RNF4-212ENST00000509258 GHRHRQ02643 423 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
RNF4-212ENST00000509258 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 WTAPQ15007 396 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 CCDC85BQ15834 202 aaPredicted RBP12.68□□□□□ -0.38
RNF4-212ENST00000509258 LY6KQ17RY6 165 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 DEFB128Q7Z7B8 93 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 HOMER1Q86YM7 354 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 RAB11FIP4Q86YS3 637 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 NCOA7Q8NI08 942 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 ADAMTS19Q8TE59 1207 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 PIBF1Q8WXW3 757 aa12.68□□□□□ -0.38
RNF4-212ENST00000509258 ZBTB5O15062 677 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 CFBP00751 764 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 TXNP10599 105 aaKnown RBP12.67□□□□□ -0.38
RNF4-212ENST00000509258 RXRAP19793 462 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 TRDNQ13061 729 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 TTLL4Q14679 1199 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 NECTIN1Q15223 517 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 NBPF20Q3BBV1 942 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 SEPT14Q6ZU15 432 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 GPKOWQ92917 476 aaPredicted RBP eCLIP12.67□□□□□ -0.38
RNF4-212ENST00000509258 SLC9A7Q96T83 725 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 AMNQ9BXJ7 453 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 LRRC2Q9BYS8 371 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 BCAS3Q9H6U6 928 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 PXMP2Q9NR77 195 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
RNF4-212ENST00000509258 MRPL11Q9Y3B7 192 aaKnown RBP12.67□□□□□ -0.38
RNF4-212ENST00000509258 BDP1A6H8Y1 2624 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 SH2B2O14492 632 aaPredicted RBP12.66□□□□□ -0.38
RNF4-212ENST00000509258 PRC1O43663 620 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 SORBS3O60504 671 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 PLEKHA8P1O95397 391 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 CA3P07451 260 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 MYOGP15173 224 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 BFSP2Q13515 415 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
RNF4-212ENST00000509258 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 ZNF654Q8IZM8 581 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 CMTR1Q8N1G2 835 aaKnown RBP12.66□□□□□ -0.38
RNF4-212ENST00000509258 CCDC155Q8N6L0 562 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 PHOSPHO2Q8TCD6 241 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 AFG1LQ8WV93 481 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 UHRF1Q96T88 793 aaPredicted RBP12.66□□□□□ -0.38
RNF4-212ENST00000509258 PCDHA1Q9Y5I3 950 aa12.66□□□□□ -0.38
RNF4-212ENST00000509258 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
RNF4-212ENST00000509258 BAIAP3O94812 1187 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 NR3C2P08235 984 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 IQCF3P0C7M6 154 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 SP2Q02086 613 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 BMP2KLQ5H9B9 411 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
RNF4-212ENST00000509258 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 MICALL1Q8N3F8 863 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 NSUN6Q8TEA1 469 aaKnown RBP12.65□□□□□ -0.38
RNF4-212ENST00000509258 KAT2BQ92831 832 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 PDCD2LQ9BRP1 358 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 DDX41Q9UJV9 622 aaKnown RBP12.65□□□□□ -0.38
RNF4-212ENST00000509258 TELO2Q9Y4R8 837 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 KAT6AQ92794 2004 aa12.65□□□□□ -0.38
RNF4-212ENST00000509258 XIRP2A4UGR9 3374 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 MMP3P08254 477 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms