RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 GHRHRQ02643 423 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 DGKZQ13574 1117 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.69■■□□□ 1.54
PTPN13-205ENST00000502971 TRIM9Q9C026 710 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 XPO4Q9C0E2 1151 aaKnown RBP24.69■■□□□ 1.54
PTPN13-205ENST00000502971 NT5C3AQ9H0P0 336 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 BLOC1S4Q9NUP1 217 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 RABGAP1Q9Y3P9 1069 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 SMCHD1A6NHR9 2005 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 ZBED4O75132 1171 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 RHOBTB3O94955 611 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 ATP1A3P13637 1013 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 KMT5BQ4FZB7 885 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 SPATA1Q5VX52 437 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 LARP4BQ92615 738 aaKnown RBP24.69■■□□□ 1.54
PTPN13-205ENST00000502971 RAD54LQ92698 747 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 MED15Q96RN5 788 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 MAP3K20Q9NYL2 800 aaKnown RBP24.69■■□□□ 1.54
PTPN13-205ENST00000502971 CTDP1Q9Y5B0 961 aaPredicted RBP24.69■■□□□ 1.54
PTPN13-205ENST00000502971 SYNRGQ9UMZ2 1314 aa24.68■■□□□ 1.54
PTPN13-205ENST00000502971 USP2O75604 605 aaPredicted RBP24.68■■□□□ 1.54
PTPN13-205ENST00000502971 ZNF18P17022 549 aa24.68■■□□□ 1.54
PTPN13-205ENST00000502971 CLCN1P35523 988 aa24.68■■□□□ 1.54
PTPN13-205ENST00000502971 CCDC186Q7Z3E2 898 aa24.68■■□□□ 1.54
PTPN13-205ENST00000502971 TRMT44Q8IYL2 757 aaKnown RBP24.68■■□□□ 1.54
PTPN13-205ENST00000502971 GJA10Q969M2 543 aa24.68■■□□□ 1.54
PTPN13-205ENST00000502971 NUDT12Q9BQG2 462 aa24.68■■□□□ 1.54
PTPN13-205ENST00000502971 FZD1Q9UP38 647 aa24.68■■□□□ 1.54
PTPN13-205ENST00000502971 POLR2AP24928 1970 aaKnown RBP24.67■■□□□ 1.54
PTPN13-205ENST00000502971 SERPINC1P01008 464 aa24.67■■□□□ 1.54
PTPN13-205ENST00000502971 SMYD4Q8IYR2 804 aaPredicted RBP24.67■■□□□ 1.54
PTPN13-205ENST00000502971 CLEC4DQ8WXI8 215 aa24.67■■□□□ 1.54
PTPN13-205ENST00000502971 PHIPQ8WWQ0 1821 aa24.67■■□□□ 1.54
PTPN13-205ENST00000502971 EAPPQ56P03 285 aaPredicted RBP24.66■■□□□ 1.54
PTPN13-205ENST00000502971 KLHL10Q6JEL2 608 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 RAVER2Q9HCJ3 691 aaKnown RBP24.66■■□□□ 1.54
PTPN13-205ENST00000502971 IMPACTQ9P2X3 320 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 RWDD2AQ9UIY3 292 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 IGLV3-22A0A075B6J6 115 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 MSH4O15457 936 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 ZNF500O60304 480 aaPredicted RBP24.66■■□□□ 1.54
PTPN13-205ENST00000502971 PTGS1P23219 599 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 CCT6AP40227 531 aaKnown RBP24.66■■□□□ 1.54
PTPN13-205ENST00000502971 UBASH3AP57075 661 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 MAP3K9P80192 1104 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 HAUS3Q68CZ6 603 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 CNNM4Q6P4Q7 775 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 KRT26Q7Z3Y9 468 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 CPXCR1Q8N123 301 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 ERMNQ8TAM6 284 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 ZNF830Q96NB3 372 aaPredicted RBP24.66■■□□□ 1.54
PTPN13-205ENST00000502971 TMOD4Q9NZQ9 345 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 NRBP1Q9UHY1 535 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 AFG3L2Q9Y4W6 797 aa24.66■■□□□ 1.54
PTPN13-205ENST00000502971 VWA5AO00534 786 aa24.65■■□□□ 1.54
PTPN13-205ENST00000502971 HMGCS2P54868 508 aa24.65■■□□□ 1.54
PTPN13-205ENST00000502971 ASIC1P78348 528 aa24.65■■□□□ 1.54
PTPN13-205ENST00000502971 SPIRE1Q08AE8 756 aa24.65■■□□□ 1.54
PTPN13-205ENST00000502971 MCM6Q14566 821 aa24.65■■□□□ 1.54
PTPN13-205ENST00000502971 GIMAP8Q8ND71 665 aaPredicted RBP24.65■■□□□ 1.54
PTPN13-205ENST00000502971 ALAS1P13196 640 aa24.64■■□□□ 1.54
PTPN13-205ENST00000502971 CDK11BP21127 795 aaKnown RBP24.64■■□□□ 1.54
PTPN13-205ENST00000502971 PAK1Q13153 545 aa24.64■■□□□ 1.54
PTPN13-205ENST00000502971 STIM1Q13586 685 aa24.64■■□□□ 1.54
PTPN13-205ENST00000502971 RRAGCQ9HB90 399 aa24.64■■□□□ 1.54
PTPN13-205ENST00000502971 EXOC1Q9NV70 894 aa24.64■■□□□ 1.54
PTPN13-205ENST00000502971 CTNND2Q9UQB3 1225 aa24.64■■□□□ 1.54
PTPN13-205ENST00000502971 GDAQ9Y2T3 454 aa24.64■■□□□ 1.54
PTPN13-205ENST00000502971 PVALEFA0A1B0GWK0 134 aa24.64■■□□□ 1.53
PTPN13-205ENST00000502971 HOXA7P31268 230 aaPredicted RBP24.64■■□□□ 1.53
PTPN13-205ENST00000502971 PPP1R2P41236 205 aa24.64■■□□□ 1.53
PTPN13-205ENST00000502971 ECM1Q16610 540 aa24.64■■□□□ 1.53
PTPN13-205ENST00000502971 ADSSL1Q8N142 457 aa24.64■■□□□ 1.53
PTPN13-205ENST00000502971 RBM46Q8TBY0 533 aaKnown RBP24.64■■□□□ 1.53
PTPN13-205ENST00000502971 KCNF1Q9H3M0 494 aa24.64■■□□□ 1.53
PTPN13-205ENST00000502971 NFIBO00712 420 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 PPP1R12BO60237 982 aaPredicted RBP24.63■■□□□ 1.53
PTPN13-205ENST00000502971 DSG3P32926 999 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 PRCPP42785 496 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 OAZ1P54368 228 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 STX17P56962 302 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 SETQ01105 290 aaPredicted RBP24.63■■□□□ 1.53
PTPN13-205ENST00000502971 CCDC144BQ3MJ40 725 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 SH3D19Q5HYK7 790 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 CYP2W1Q8TAV3 490 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 ATG4CQ96DT6 458 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 SAMSN1Q9NSI8 373 aaKnown RBP24.63■■□□□ 1.53
PTPN13-205ENST00000502971 ADAMTS5Q9UNA0 930 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 PARP14Q460N5 1801 aa24.63■■□□□ 1.53
PTPN13-205ENST00000502971 RPTORQ8N122 1335 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 MYMKA6NI61 221 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 ADM5C9JUS6 153 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 GSDMDP57764 484 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 PDE4DQ08499 809 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 PRKG1Q13976 671 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 DHX8Q14562 1220 aaKnown RBP24.62■■□□□ 1.53
PTPN13-205ENST00000502971 COG2Q14746 738 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 CEP55Q53EZ4 464 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.62■■□□□ 1.53
PTPN13-205ENST00000502971 UNC13DQ70J99 1090 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms