RNA–Protein interactions for RNA: ENST00000497565.1

BRPF1-208, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-208ENST00000497565 DDX41Q9UJV9 622 aaKnown RBP15.05■□□□□ -0
BRPF1-208ENST00000497565 MRVI1Q9Y6F6 885 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 TAF6LQ9Y6J9 622 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 SCN10AQ9Y5Y9 1956 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 LAMA2P24043 3122 aaKnown RBP15.05■□□□□ -0
BRPF1-208ENST00000497565 SH2B2O14492 632 aaPredicted RBP15.04■□□□□ -0
BRPF1-208ENST00000497565 ARIH2O95376 493 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 FGBP02675 491 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 CCND2P30279 289 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 CYP2C18P33260 490 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 RFC2P35250 354 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 KRT32Q14532 448 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 NBPF20Q3BBV1 942 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 TSGA10IPQ3SY00 556 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 RASIP1Q5U651 963 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 XRRA1Q6P2D8 792 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 SYNE3Q6ZMZ3 975 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 SESTD1Q86VW0 696 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 PPTC7Q8NI37 304 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 HERVK_113Q902F9 699 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 COPS5Q92905 334 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 SENP2Q9HC62 589 aa15.04■□□□□ -0
BRPF1-208ENST00000497565 PIK3CDO00329 1044 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 PITPNM1O00562 1244 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 PPFIA4O75335 1185 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 MMP3P08254 477 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 PTGS1P23219 599 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 ARHGAP1Q07960 439 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 BFSP2Q13515 415 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 PGM5Q15124 567 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 LY6KQ17RY6 165 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 GNPTABQ3T906 1256 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 ZNF365Q70YC5 407 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 C16orf59Q7L2K0 433 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 SGMS1Q86VZ5 419 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 DHX37Q8IY37 1157 aaKnown RBP15.03■□□□□ -0
BRPF1-208ENST00000497565 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 RETREG2Q8NC44 543 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 AFG1LQ8WV93 481 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 CUL5Q93034 780 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 SLC12A7Q9Y666 1083 aa15.03■□□□□ -0
BRPF1-208ENST00000497565 KIAA1217Q5T5P2 1943 aa15.02■□□□□ -0
BRPF1-208ENST00000497565 CDC45O75419 566 aa15.02■□□□□ -0
BRPF1-208ENST00000497565 PARNO95453 639 aaKnown RBP15.02■□□□□ -0
BRPF1-208ENST00000497565 HMGB1P09429 215 aaKnown RBP15.02■□□□□ -0
BRPF1-208ENST00000497565 MYCLP12524 364 aaPredicted RBP15.02■□□□□ -0
BRPF1-208ENST00000497565 HOXA13P31271 388 aaPredicted RBP15.02■□□□□ -0
BRPF1-208ENST00000497565 SLC35G1Q2M3R5 365 aa15.02■□□□□ -0
BRPF1-208ENST00000497565 FAM47CQ5HY64 1035 aa15.02■□□□□ -0
BRPF1-208ENST00000497565 SLC17A8Q8NDX2 589 aa15.02■□□□□ -0
BRPF1-208ENST00000497565 TRMT13Q9NUP7 481 aaKnown RBP15.02■□□□□ -0
BRPF1-208ENST00000497565 NOD1Q9Y239 953 aa15.02■□□□□ -0
BRPF1-208ENST00000497565 FRMPD4Q14CM0 1322 aa15.01□□□□□ -0.01
BRPF1-208ENST00000497565 HOXD8P13378 290 aaPredicted RBP15.01□□□□□ -0.01
BRPF1-208ENST00000497565 RAB30Q15771 203 aa15.01□□□□□ -0.01
BRPF1-208ENST00000497565 CELF3Q5SZQ8 465 aaKnown RBP15.01□□□□□ -0.01
BRPF1-208ENST00000497565 FCHSD1Q86WN1 690 aa15.01□□□□□ -0.01
BRPF1-208ENST00000497565 FANCBQ8NB91 859 aa15.01□□□□□ -0.01
BRPF1-208ENST00000497565 CAGE1Q8TC20 777 aa15.01□□□□□ -0.01
BRPF1-208ENST00000497565 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
BRPF1-208ENST00000497565 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
BRPF1-208ENST00000497565 NEK1Q96PY6 1258 aa15.01□□□□□ -0.01
BRPF1-208ENST00000497565 RBM28Q9NW13 759 aaKnown RBP15.01□□□□□ -0.01
BRPF1-208ENST00000497565 ACRP10323 421 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 ACTN1P12814 892 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 ICAM3P32942 547 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 RCAN1P53805 252 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 CCL23P55773 120 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 NEDD9Q14511 834 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 DHX32Q7L7V1 743 aaKnown RBP15□□□□□ -0.01
BRPF1-208ENST00000497565 SMARCC2Q8TAQ2 1214 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 MSRAQ9UJ68 235 aa15□□□□□ -0.01
BRPF1-208ENST00000497565 RGS20O76081 388 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 CYP2C9P11712 490 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 DNAJB2P25686 324 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 PTGISQ16647 500 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 SRBD1Q8N5C6 995 aaKnown RBP14.99□□□□□ -0.01
BRPF1-208ENST00000497565 C7orf31Q8N865 590 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 GIMAP8Q8ND71 665 aaPredicted RBP14.99□□□□□ -0.01
BRPF1-208ENST00000497565 KAT2BQ92831 832 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 TIFAQ96CG3 184 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 CDHR1Q96JP9 859 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 SPATA33Q96N06 139 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 INPP4AQ96PE3 977 aaPredicted RBP14.99□□□□□ -0.01
BRPF1-208ENST00000497565 CDX2Q99626 313 aaPredicted RBP14.99□□□□□ -0.01
BRPF1-208ENST00000497565 WNT8AQ9H1J5 351 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 PSTPIP2Q9H939 334 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 MLXIPQ9HAP2 919 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 COL6A3P12111 3177 aa14.99□□□□□ -0.01
BRPF1-208ENST00000497565 UMODL1Q5DID0 1318 aa14.98□□□□□ -0.01
BRPF1-208ENST00000497565 FIBPO43427 364 aa14.98□□□□□ -0.01
BRPF1-208ENST00000497565 GGPS1O95749 300 aa14.98□□□□□ -0.01
BRPF1-208ENST00000497565 F2P00734 622 aa14.98□□□□□ -0.01
BRPF1-208ENST00000497565 IQCF3P0C7M6 154 aa14.98□□□□□ -0.01
BRPF1-208ENST00000497565 PSEN2P49810 448 aa14.98□□□□□ -0.01
BRPF1-208ENST00000497565 EXOSC10Q01780 885 aaKnown RBP14.98□□□□□ -0.01
BRPF1-208ENST00000497565 RBL2Q08999 1139 aa14.98□□□□□ -0.01
BRPF1-208ENST00000497565 PCNX4Q63HM2 1172 aa14.98□□□□□ -0.01
BRPF1-208ENST00000497565 TMTC3Q6ZXV5 915 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms