RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 COPS5Q92905 334 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 TAAR1Q96RJ0 339 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 AMNQ9BXJ7 453 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 PRRC2BQ5JSZ5 2229 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 B4E1Z4 1266 aa19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 DHX16O60231 1041 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 ARIH2O95376 493 aa19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 TGFB3P10600 412 aa19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 ARHGAP1Q07960 439 aa19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 SEPT14Q6ZU15 432 aa19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 JMJD4Q9H9V9 463 aa19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 DDX41Q9UJV9 622 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-207ENST00000497251 PPFIA4O75335 1185 aa19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 NR3C2P08235 984 aa19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 SELPP16109 830 aa19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 HSD17B4P51659 736 aa19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 B4GALNT3Q6L9W6 998 aa19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 HERC6Q8IVU3 1022 aa19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 PPTC7Q8NI37 304 aa19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 COG5Q9UP83 839 aa19.61■□□□□ 0.73
TRAPPC3-207ENST00000497251 CA3P07451 260 aa19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 KCNJ6P48051 423 aa19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 CCDC85BQ15834 202 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 LY6KQ17RY6 165 aa19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 C7orf31Q8N865 590 aa19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 TBC1D5Q92609 795 aa19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 MTMR8Q96EF0 704 aa19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 PXMP2Q9NR77 195 aa19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 GTF2IRD1Q9UHL9 959 aa19.6■□□□□ 0.73
TRAPPC3-207ENST00000497251 GBF1Q92538 1859 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 ABHD14A-ACY1A0A1B0GW23 586 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 ZBTB5O15062 677 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 CXCL10P02778 98 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 HOXD8P13378 290 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 MYOGP15173 224 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 TRDNQ13061 729 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 STOX1Q6ZVD7 989 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 ADAMTS19Q8TE59 1207 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 KAT2BQ92831 832 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 UHRF1Q96T88 793 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 CPVLQ9H3G5 476 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 LMCD1Q9NZU5 365 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 COL20A1Q9P218 1284 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 MRVI1Q9Y6F6 885 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 TRANK1O15050 2925 aa19.59■□□□□ 0.73
TRAPPC3-207ENST00000497251 LAMA4Q16363 1823 aa19.58■□□□□ 0.73
TRAPPC3-207ENST00000497251 KLRF2D3W0D1 207 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 F2P00734 622 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 CFBP00751 764 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 PTK7Q13308 1070 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 GDF6Q6KF10 455 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 CNKSR3Q6P9H4 555 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 LRRC8DQ7L1W4 858 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 DHX37Q8IY37 1157 aaKnown RBP19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 VAT1LQ9HCJ6 419 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 MTCH2Q9Y6C9 303 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 TET1Q8NFU7 2136 aa19.58■□□□□ 0.72
TRAPPC3-207ENST00000497251 TRIP12Q14669 1992 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 KIAA1217Q5T5P2 1943 aa19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 HAS3O00219 553 aa19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 TLL1O43897 1013 aa19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 TAP1Q03518 808 aa19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 VSIG10LQ86VR7 867 aa19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 RUFY2Q8WXA3 655 aa19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 PDCD2LQ9BRP1 358 aa19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 PCDHA1Q9Y5I3 950 aa19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 U3KPZ7 1027 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC3-207ENST00000497251 EMSYQ7Z589 1322 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 PALM3A6NDB9 673 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 STAM2O75886 525 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 IGHDP01880 384 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 EIF2AK2P19525 551 aaKnown RBP19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 PSEN2P49810 448 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 SEC23AQ15436 765 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 CHST3Q7LGC8 479 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 CTAGE1Q96RT6 745 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 MYH6P13533 1939 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 SCN5AQ14524 2016 aa19.56■□□□□ 0.72
TRAPPC3-207ENST00000497251 ERICH2A1L162 156 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 CKBP12277 381 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 BMP1P13497 986 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 CHMP4BP1P59074 171 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 WDR5P61964 334 aaKnown RBP19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 IKBKEQ14164 716 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 MFSD10Q14728 455 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 SART3Q15020 963 aaKnown RBP19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 KIAA0753Q2KHM9 967 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 CELF3Q5SZQ8 465 aaKnown RBP19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 RAD9AQ99638 391 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 TANC1Q9C0D5 1861 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 RIOX1Q9H6W3 641 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 HDAC6Q9UBN7 1215 aa19.55■□□□□ 0.72
TRAPPC3-207ENST00000497251 OPLAHO14841 1288 aa19.54■□□□□ 0.72
TRAPPC3-207ENST00000497251 SKIV2LQ15477 1246 aaKnown RBP19.54■□□□□ 0.72
TRAPPC3-207ENST00000497251 ZBED2Q9BTP6 218 aa19.54■□□□□ 0.72
TRAPPC3-207ENST00000497251 MAD2L2Q9UI95 211 aa19.54■□□□□ 0.72
TRAPPC3-207ENST00000497251 GCOM1H8Y6P7 765 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-207ENST00000497251 POLR2MP0CAP2 368 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms