RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 INF2Q27J81 1249 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 LETM2Q2VYF4 491 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 KCNV1Q6PIU1 500 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 SEPT14Q6ZU15 432 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 BRAPQ7Z569 592 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 VSIG10LQ86VR7 867 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 FBXO16Q8IX29 292 aaPredicted RBP8.65□□□□□ -1.02
VEGFA-214ENST00000493786 IL31RAQ8NI17 732 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 MORC4Q8TE76 937 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 SH3TC2Q8TF17 1288 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 CDHR1Q96JP9 859 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 MCOLN1Q9GZU1 580 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 TCEAL9Q9UHQ7 104 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 FAM184BQ9ULE4 1060 aa8.65□□□□□ -1.02
VEGFA-214ENST00000493786 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 ASTN1O14525 1302 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 FIBPO43427 364 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 MARCH6O60337 910 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 CCNT1O60563 726 aaKnown RBP8.64□□□□□ -1.03
VEGFA-214ENST00000493786 MSCO60682 206 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 SNAI1O95863 264 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-214ENST00000493786 CYP3A4P08684 503 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 CYBAP13498 195 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 AKR1A1P14550 325 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 ATP2B1P20020 1258 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 U2AF2P26368 475 aaKnown RBP eCLIP8.64□□□□□ -1.032e-48■□□□□ 11.2
VEGFA-214ENST00000493786 TRAPPC10P48553 1259 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 CACNB2Q08289 660 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-214ENST00000493786 MTMR1Q13613 665 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 TTLL4Q14679 1199 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 CEP55Q53EZ4 464 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 SCFD2Q8WU76 684 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 GPRASP2Q96D09 838 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 IPO9Q96P70 1041 aaKnown RBP8.64□□□□□ -1.03
VEGFA-214ENST00000493786 MXRA8Q9BRK3 442 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 ZSCAN16Q9H4T2 348 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-214ENST00000493786 HMX1Q9NP08 348 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-214ENST00000493786 RTEL1Q9NZ71 1219 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 MRVI1Q9Y6F6 885 aa8.64□□□□□ -1.03
VEGFA-214ENST00000493786 KIF28PB7ZC32 967 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 ADAMTS3O15072 1205 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.032e-6■□□□□ 8.4
VEGFA-214ENST00000493786 MAFGO15525 162 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 SEPT4O43236 478 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 MYCP01106 439 aaPredicted RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 ZSCAN22P10073 491 aaPredicted RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 TXNP10599 105 aaKnown RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 RARBP10826 455 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 NUCB2P80303 420 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 MRPS9P82933 396 aaKnown RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 TNFAIP2Q03169 654 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 TRIM32Q13049 653 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 CCDC144BQ3MJ40 725 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 PRR16Q569H4 304 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 BRDTQ58F21 947 aaPredicted RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 RILPL1Q5EBL4 403 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 PRAMEF19Q5SWL8 479 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 IQSEC1Q6DN90 963 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 MOXD1Q6UVY6 613 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 NIPA1Q7RTP0 329 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 FERMT3Q86UX7 667 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 PLA2G4DQ86XP0 818 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 GIMAP8Q8ND71 665 aaPredicted RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 TNFRSF25Q93038 417 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 INPP4AQ96PE3 977 aaPredicted RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 WDR11Q9BZH6 1224 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 SPC25Q9HBM1 224 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 JADE2Q9NQC1 790 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 DDX25Q9UHL0 483 aaKnown RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 MTMR6Q9Y217 621 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 ATP6V1DQ9Y5K8 247 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 UBIAD1Q9Y5Z9 338 aa8.63□□□□□ -1.03
VEGFA-214ENST00000493786 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
VEGFA-214ENST00000493786 ZNFX1Q9P2E3 1918 aaKnown RBP8.62□□□□□ -1.03
VEGFA-214ENST00000493786 PLXNA1Q9UIW2 1896 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 FAM205CA6NFA0 338 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 NEMFO60524 1076 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 BAG4O95429 457 aaKnown RBP8.62□□□□□ -1.03
VEGFA-214ENST00000493786 TDP2O95551 362 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 ZNF865P0CJ78 1059 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-214ENST00000493786 TGFB3P10600 412 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 ITGB5P18084 799 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 CIITAP33076 1130 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 ADCYAP1R1P41586 468 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 ORC2Q13416 577 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-214ENST00000493786 NEDD9Q14511 834 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 TTC38Q5R3I4 469 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 MAP3K21Q5TCX8 1036 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-214ENST00000493786 PPP4R3AQ6IN85 833 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 FOXD4L4Q8WXT5 416 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-214ENST00000493786 ARMC5Q96C12 935 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 ZNF333Q96JL9 665 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 ZFP91Q96JP5 570 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-214ENST00000493786 SDF4Q9BRK5 362 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 ZNF577Q9BSK1 485 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 TMEM106CQ9BVX2 250 aa8.62□□□□□ -1.03
VEGFA-214ENST00000493786 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.62□□□□□ -1.035e-7■■■■□ 24.8
VEGFA-214ENST00000493786 AP5M1Q9H0R1 490 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 242.4 ms