RNA–Protein interactions for RNA: ENST00000492337.5

SOX2-OT-213, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 2,508 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-213ENST00000492337 CCDC96Q2M329 555 aa11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 ZCWPW2Q504Y3 356 aa11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 C2CD5Q86YS7 1000 aa11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 PROM2Q8N271 834 aa11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 CAGE1Q8TC20 777 aa11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 RIC8AQ9NPQ8 531 aa11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 BIN2Q9UBW5 565 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 SAP30BPQ9UHR5 308 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 RRP15Q9Y3B9 282 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-213ENST00000492337 SLC37A4O43826 429 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 SNHG28P0DPA3 235 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 TNNT3P45378 269 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 CALCRLQ16602 461 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 PDXDC1Q6P996 788 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 SLC51AQ86UW1 340 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 SPATA4Q8NEY3 305 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 OSBPL9Q96SU4 736 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 LRRC27Q9C0I9 530 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 MLXIPQ9HAP2 919 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 ANKIB1Q9P2G1 1089 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 HYOU1Q9Y4L1 999 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 GAKO14976 1311 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 LRRC53A6NM62 1247 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 PDHBP11177 359 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 IL1R1P14778 569 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 PLCG2P16885 1265 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 GGCXP38435 758 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 TXKP42681 527 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 NFIXQ14938 502 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 SEPT2Q15019 361 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 HGSNATQ68CP4 663 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 SYN2Q92777 582 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 SH3GL2Q99962 352 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 FOCADQ5VW36 1801 aa11.2□□□□□ -0.62
SOX2-OT-213ENST00000492337 USP17L5A8MUK1 530 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 ZMYND10O75800 440 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 MOCS3O95396 460 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 TMEM266Q2M3C6 531 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 HYIQ5T013 277 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 PPP4R3AQ6IN85 833 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 CCDC70Q6NSX1 233 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 PPP1R18Q6NYC8 613 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 FOXR1Q6PIV2 292 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 RNF10Q8N5U6 811 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 RAB34Q9BZG1 259 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 FAM207AQ9NSI2 230 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 IGKV6D-41A0A0C4DH26 115 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 MARSP56192 900 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 ASPRV1Q53RT3 343 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 AMIGO3Q86WK7 504 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 GSPT2Q8IYD1 628 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 TEX11Q8IYF3 940 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 DDX12PQ92771 950 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 TRERF1Q96PN7 1200 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 ALS2CR12Q96Q35 445 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 CRACR2AQ9BSW2 395 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 LRRC1Q9BTT6 524 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 CD209Q9NNX6 404 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 DMGDHQ9UI17 866 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 SALL4Q9UJQ4 1053 aa11.19□□□□□ -0.62
SOX2-OT-213ENST00000492337 GNPATO15228 680 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 PPFIA4O75335 1185 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 CLSTN1O94985 981 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 TDP2O95551 362 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 ADCY7P51828 1080 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 GABPAQ06546 454 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 SF3B2Q13435 895 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 EZH2Q15910 746 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 HAUS3Q68CZ6 603 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 RRAGAQ7L523 313 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 KCNK18Q7Z418 384 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 GOLGA6L1Q8N7Z2 621 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 RIN2Q8WYP3 895 aaPredicted RBP11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 ARHGEF1Q92888 912 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 TLR10Q9BXR5 811 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 NUCKS1Q9H1E3 243 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 RASSF4Q9H2L5 321 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 RNF14Q9UBS8 474 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 POTEMA6NI47 508 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 AKR1B10O60218 316 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 NOL4O94818 638 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 EPB41P11171 864 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 MAGEA1P43355 309 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 GLE1Q53GS7 698 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 KLHDC7AQ5VTJ3 777 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 NFRKBQ6P4R8 1299 aa11.18□□□□□ -0.62
SOX2-OT-213ENST00000492337 PTF1AQ7RTS3 328 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms