RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 NBPF20Q3BBV1 942 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 CCDC62Q6P9F0 684 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 AFG1LQ8WV93 481 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 PIBF1Q8WXW3 757 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 PDCD2LQ9BRP1 358 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 MLXIPQ9HAP2 919 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 LY9Q9HBG7 655 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 HOXA13P31271 388 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 NECTIN1Q15223 517 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 XRRA1Q6P2D8 792 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 VSIG10LQ86VR7 867 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 C7orf31Q8N865 590 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 COPS5Q92905 334 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 NEK1Q96PY6 1258 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 EHMT1Q9H9B1 1298 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 COL20A1Q9P218 1284 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 MSRAQ9UJ68 235 aa19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 DDX41Q9UJV9 622 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-217ENST00000491330 SH2B2O14492 632 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 MMP3P08254 477 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 RFC2P35250 354 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 CCL23P55773 120 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 ANTXR2P58335 489 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 PGM5Q15124 567 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 TMEM240Q5SV17 173 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 TMEM63BQ5T3F8 832 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 ZNF365Q70YC5 407 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 PPTC7Q8NI37 304 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 EMID1Q96A84 441 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 FAM161BQ96MY7 647 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 NOC4LQ9BVI4 516 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 RBM28Q9NW13 759 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 PPP4R2Q9NY27 417 aa19.1■□□□□ 0.65
PDLIM2-217ENST00000491330 NOP56O00567 594 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 PPFIA4O75335 1185 aa19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 PARNO95453 639 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 EPHB4P54760 987 aa19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 RAB30Q15771 203 aa19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 NLRX1Q86UT6 975 aa19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 FANCBQ8NB91 859 aa19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 SPATA33Q96N06 139 aa19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 SEMA6BQ9H3T3 888 aa19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 TRMT13Q9NUP7 481 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-217ENST00000491330 GRIN2DO15399 1336 aa19.08■□□□□ 0.65
PDLIM2-217ENST00000491330 ZBBXA8MT70 800 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 EPB41L2O43491 1005 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 PPP1R11O60927 126 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 ACRP10323 421 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 ARHGAP1Q07960 439 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 NEDD9Q14511 834 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 PTGISQ16647 500 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 GIMAP8Q8ND71 665 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 HERVK_113Q902F9 699 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 CDHR1Q96JP9 859 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 PSTPIP2Q9H939 334 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 SENP2Q9HC62 589 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 TAF6LQ9Y6J9 622 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 SLC4A7Q9Y6M7 1214 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 MCM3APO60318 1980 aa19.08■□□□□ 0.64
PDLIM2-217ENST00000491330 SPDYE3A6NKU9 549 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 PITPNM1O00562 1244 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 CYTH3O43739 400 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 ARIH2O95376 493 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 GGPS1O95749 300 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 PTGS1P23219 599 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 DHX32Q7L7V1 743 aaKnown RBP19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 TEX2Q8IWB9 1127 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 CAGE1Q8TC20 777 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 TIFAQ96CG3 184 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 MYL10Q9BUA6 226 aa19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 FTOQ9C0B1 505 aaKnown RBP eCLIP19.07■□□□□ 0.64
PDLIM2-217ENST00000491330 CCDC196A0A1B0GTZ2 297 aa19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 REC8O95072 547 aa19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 CYP2C9P11712 490 aa19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 DNAJB2P25686 324 aa19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 CELF3Q5SZQ8 465 aaKnown RBP19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 MICU3Q86XE3 530 aa19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 GLT8D2Q9H1C3 349 aa19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 NAP1L2Q9ULW6 460 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 MYH6P13533 1939 aa19.06■□□□□ 0.64
PDLIM2-217ENST00000491330 PIK3CDO00329 1044 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 OPLAHO14841 1288 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 ZBTB43O43298 467 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 FIBPO43427 364 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 PSEN2P49810 448 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 TSGA10IPQ3SY00 556 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 OTOP2Q7RTS6 562 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 SESTD1Q86VW0 696 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 SGMS1Q86VZ5 419 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 SLC28A3Q9HAS3 691 aa19.05■□□□□ 0.64
PDLIM2-217ENST00000491330 KIF28PB7ZC32 967 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 hCG_1984214I3L0E3 225 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 GNAT1P11488 350 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 FOSL2P15408 326 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 PSMA5P28066 241 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 MFSD10Q14728 455 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 MYSM1Q5VVJ2 828 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 CCDC82Q8N4S0 544 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms