RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 COL6A3P12111 3177 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 ZBBXA8MT70 800 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 OPLAHO14841 1288 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 PFKMP08237 780 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 GHRHRQ02643 423 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 BFSP2Q13515 415 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 KCNV1Q6PIU1 500 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 NFXL1Q6ZNB6 911 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 DEFB128Q7Z7B8 93 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 VSIG10LQ86VR7 867 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 FCHSD1Q86WN1 690 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.42□□□□□ -0.1
SREBF1-215ENST00000487401 DHX37Q8IY37 1157 aaKnown RBP14.42□□□□□ -0.1
SREBF1-215ENST00000487401 MB21D2Q8IYB1 491 aaPredicted RBP14.42□□□□□ -0.1
SREBF1-215ENST00000487401 CTCFLQ8NI51 663 aaPredicted RBP14.42□□□□□ -0.1
SREBF1-215ENST00000487401 IGDCC4Q8TDY8 1250 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 PIBF1Q8WXW3 757 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 PDCD2LQ9BRP1 358 aa14.42□□□□□ -0.1
SREBF1-215ENST00000487401 LTBP2Q14767 1821 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 PRC1O43663 620 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 CYTH3O43739 400 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 ACTN1P12814 892 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 CCND2P30279 289 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 KIF5BP33176 963 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 RFC2P35250 354 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 ANTXR2P58335 489 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 PTGISQ16647 500 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 SLC35G1Q2M3R5 365 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 TMTC2Q8N394 836 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 CCDC155Q8N6L0 562 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 EMID1Q96A84 441 aaPredicted RBP14.41□□□□□ -0.1
SREBF1-215ENST00000487401 MAP3K14Q99558 947 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 LZTS2Q9BRK4 669 aa14.41□□□□□ -0.1
SREBF1-215ENST00000487401 FTOQ9C0B1 505 aaKnown RBP eCLIP14.41□□□□□ -0.1
SREBF1-215ENST00000487401 A0A0C4DFX4 3053 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 CCDC69A6NI79 296 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 MCM5P33992 734 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 GNAQP50148 359 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 PGM5Q15124 567 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 PPTC7Q8NI37 304 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 RRP36Q96EU6 259 aaKnown RBP14.4□□□□□ -0.1
SREBF1-215ENST00000487401 GAS2L1Q99501 681 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-215ENST00000487401 ESYT1Q9BSJ8 1104 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 MTA3Q9BTC8 594 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 KATNAL1Q9BW62 490 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 LSG1Q9H089 658 aaKnown RBP14.4□□□□□ -0.1
SREBF1-215ENST00000487401 LY9Q9HBG7 655 aa14.4□□□□□ -0.1
SREBF1-215ENST00000487401 SLC27A2O14975 620 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 SORBS3O60504 671 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 DDAH1O94760 285 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 IQCF3P0C7M6 154 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 TGFB3P10600 412 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 ATP2A2P16615 1042 aaKnown RBP14.39□□□□□ -0.11
SREBF1-215ENST00000487401 PSEN2P49810 448 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 CELF3Q5SZQ8 465 aaKnown RBP14.39□□□□□ -0.11
SREBF1-215ENST00000487401 SESTD1Q86VW0 696 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 ZNF654Q8IZM8 581 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 KAT2BQ92831 832 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 CUL5Q93034 780 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 TMEM87BQ96K49 555 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 SPATA33Q96N06 139 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 ALG1Q9BT22 464 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 NKX2-4Q9H2Z4 354 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 SLC28A3Q9HAS3 691 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 ANO2Q9NQ90 1003 aa14.39□□□□□ -0.11
SREBF1-215ENST00000487401 SEC63Q9UGP8 760 aaKnown RBP14.39□□□□□ -0.11
SREBF1-215ENST00000487401 PPFIA4O75335 1185 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 RGS20O76081 388 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 GGPS1O95749 300 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 CENPBP07199 599 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-215ENST00000487401 RABGGTBP53611 331 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 MFSD10Q14728 455 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 MYSM1Q5VVJ2 828 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 CREB3L3Q68CJ9 461 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 GDF6Q6KF10 455 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-215ENST00000487401 IL31RAQ8NI17 732 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 CAGE1Q8TC20 777 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 ZFP91Q96JP5 570 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-215ENST00000487401 MYL10Q9BUA6 226 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 SPZ1Q9BXG8 430 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 MLXIPQ9HAP2 919 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 HDAC6Q9UBN7 1215 aa14.38□□□□□ -0.11
SREBF1-215ENST00000487401 SH2B2O14492 632 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-215ENST00000487401 ZNF286BP0CG31 522 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 CALM1P0DP23 149 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 CALM2P0DP24 149 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 CALM3P0DP25 149 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 SMARCA1P28370 1054 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 KIAA0753Q2KHM9 967 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 GNPTABQ3T906 1256 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-215ENST00000487401 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 AFAP1L1Q8TED9 768 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 VWCEQ96DN2 955 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 PRDM12Q9H4Q4 367 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 GTF2IRD1Q9UHL9 959 aa14.37□□□□□ -0.11
SREBF1-215ENST00000487401 YBX2Q9Y2T7 364 aaKnown RBP14.37□□□□□ -0.11
SREBF1-215ENST00000487401 PCDHA11Q9Y5I1 949 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms