RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 RBM8AQ9Y5S9 174 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-208ENST00000482272 GBF1Q92538 1859 aa15.6■□□□□ 0.09
CTDSP1-208ENST00000482272 PNMA6FA0A0J9YX94 578 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 GRXCR1A8MXD5 290 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 GCOM1H8Y6P7 765 aaPredicted RBP15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 PFKMP08237 780 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 POLR2MP0CAP2 368 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 MYCLP12524 364 aaPredicted RBP15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 CHMP4BP1P59074 171 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 TROAPQ12815 778 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 BFSP2Q13515 415 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 LAMC2Q13753 1193 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 GRIN2CQ14957 1233 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 RAB30Q15771 203 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 MAFAQ8NHW3 353 aaPredicted RBP15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 SCLYQ96I15 445 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 NOD1Q9Y239 953 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 MRVI1Q9Y6F6 885 aa15.59■□□□□ 0.09
CTDSP1-208ENST00000482272 SCN5AQ14524 2016 aa15.58■□□□□ 0.09
CTDSP1-208ENST00000482272 BAZ2BQ9UIF8 2168 aaKnown RBP15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 MMP3P08254 477 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 ARHGAP1Q07960 439 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 DGKDQ16760 1214 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 CASC1Q6TDU7 716 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 DHX37Q8IY37 1157 aaKnown RBP15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 TMTC2Q8N394 836 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 IGDCC4Q8TDY8 1250 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 PDCD2LQ9BRP1 358 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 MTA3Q9BTC8 594 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 CXXC1Q9P0U4 656 aaPredicted RBP15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 SLC4A7Q9Y6M7 1214 aa15.58■□□□□ 0.08
CTDSP1-208ENST00000482272 TANC1Q9C0D5 1861 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 ZBBXA8MT70 800 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 ACTN1P12814 892 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 HOXA13P31271 388 aaPredicted RBP15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 RFC2P35250 354 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 PBX2P40425 430 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 PTGISQ16647 500 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 VSIG10LQ86VR7 867 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 IL31RAQ8NI17 732 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 CTCFLQ8NI51 663 aaPredicted RBP15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 EMID1Q96A84 441 aaPredicted RBP15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 MAP3K14Q99558 947 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 MYL10Q9BUA6 226 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 KATNAL1Q9BW62 490 aa15.57■□□□□ 0.08
CTDSP1-208ENST00000482272 RGS20O76081 388 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 IQCF3P0C7M6 154 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 TGFB3P10600 412 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 SMARCA1P28370 1054 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 KIF5BP33176 963 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 MCM5P33992 734 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 PGM5Q15124 567 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 DEFB128Q7Z7B8 93 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 FCHSD1Q86WN1 690 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 CCDC155Q8N6L0 562 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 GAS2L1Q99501 681 aaPredicted RBP15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 ESYT1Q9BSJ8 1104 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 SLC28A3Q9HAS3 691 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 LY9Q9HBG7 655 aa15.56■□□□□ 0.08
CTDSP1-208ENST00000482272 UNC80Q8N2C7 3258 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 MYH7BA7E2Y1 1941 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 DOCK5Q9H7D0 1870 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 CCDC69A6NI79 296 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 SLC27A2O14975 620 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 PPFIA4O75335 1185 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 DDAH1O94760 285 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 CCND2P30279 289 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 NFXL1Q6ZNB6 911 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 SESTD1Q86VW0 696 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 ZNF654Q8IZM8 581 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 C7orf31Q8N865 590 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 PPTC7Q8NI37 304 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 KAT2BQ92831 832 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 RRP36Q96EU6 259 aaKnown RBP15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 ZFP91Q96JP5 570 aaPredicted RBP15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 TMEM87BQ96K49 555 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 LZTS2Q9BRK4 669 aa15.55■□□□□ 0.08
CTDSP1-208ENST00000482272 PRC1O43663 620 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 GNAQP50148 359 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 NECTIN1Q15223 517 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 MYSM1Q5VVJ2 828 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 CAGE1Q8TC20 777 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 PIBF1Q8WXW3 757 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 GPKOWQ92917 476 aaPredicted RBP eCLIP15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 CUL5Q93034 780 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 CTAGE1Q96RT6 745 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 ALG1Q9BT22 464 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 FTOQ9C0B1 505 aaKnown RBP eCLIP15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 NKX2-4Q9H2Z4 354 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 MLXIPQ9HAP2 919 aa15.54■□□□□ 0.08
CTDSP1-208ENST00000482272 PTPRSQ13332 1948 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 STAM2O75886 525 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 PARNO95453 639 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 GGPS1O95749 300 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 CALM1P0DP23 149 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 CALM2P0DP24 149 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 CALM3P0DP25 149 aa15.53■□□□□ 0.08
CTDSP1-208ENST00000482272 ATP2A2P16615 1042 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms