RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 PTPN11Q06124 597 aaPredicted RBP20.84■□□□□ 0.93
ABCB1-204ENST00000476862 LAMC2Q13753 1193 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 TMEM240Q5SV17 173 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 NFRKBQ6P4R8 1299 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 CCDC62Q6P9F0 684 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 ZNF365Q70YC5 407 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 DHX37Q8IY37 1157 aaKnown RBP20.84■□□□□ 0.93
ABCB1-204ENST00000476862 RETREG2Q8NC44 543 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 AFG1LQ8WV93 481 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 LY9Q9HBG7 655 aa20.84■□□□□ 0.93
ABCB1-204ENST00000476862 PPP1R11O60927 126 aaPredicted RBP20.83■□□□□ 0.93
ABCB1-204ENST00000476862 DGKDQ16760 1214 aa20.83■□□□□ 0.93
ABCB1-204ENST00000476862 PDCD2LQ9BRP1 358 aa20.83■□□□□ 0.93
ABCB1-204ENST00000476862 NOC4LQ9BVI4 516 aaKnown RBP20.83■□□□□ 0.93
ABCB1-204ENST00000476862 SLC12A7Q9Y666 1083 aa20.83■□□□□ 0.93
ABCB1-204ENST00000476862 CYTH3O43739 400 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 MMP3P08254 477 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 SMARCA1P28370 1054 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 GHRHRQ02643 423 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 NECTIN1Q15223 517 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 SMARCC2Q8TAQ2 1214 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 MYL10Q9BUA6 226 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 KATNAL1Q9BW62 490 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 SPZ1Q9BXG8 430 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 SEMA6BQ9H3T3 888 aa20.82■□□□□ 0.92
ABCB1-204ENST00000476862 TRMT13Q9NUP7 481 aaKnown RBP20.82■□□□□ 0.92
ABCB1-204ENST00000476862 DDX41Q9UJV9 622 aaKnown RBP20.82■□□□□ 0.92
ABCB1-204ENST00000476862 TMEM265A0A087WTH1 108 aa20.81■□□□□ 0.92
ABCB1-204ENST00000476862 SH2B2O14492 632 aaPredicted RBP20.81■□□□□ 0.92
ABCB1-204ENST00000476862 CDC45O75419 566 aa20.81■□□□□ 0.92
ABCB1-204ENST00000476862 CYP2C9P11712 490 aa20.81■□□□□ 0.92
ABCB1-204ENST00000476862 LIFRP42702 1097 aa20.81■□□□□ 0.92
ABCB1-204ENST00000476862 PGM5Q15124 567 aa20.81■□□□□ 0.92
ABCB1-204ENST00000476862 GNPTABQ3T906 1256 aa20.81■□□□□ 0.92
ABCB1-204ENST00000476862 CCDC155Q8N6L0 562 aa20.81■□□□□ 0.92
ABCB1-204ENST00000476862 SCN10AQ9Y5Y9 1956 aa20.81■□□□□ 0.92
ABCB1-204ENST00000476862 OPLAHO14841 1288 aa20.8■□□□□ 0.92
ABCB1-204ENST00000476862 TGFB3P10600 412 aa20.8■□□□□ 0.92
ABCB1-204ENST00000476862 ARHGAP1Q07960 439 aa20.8■□□□□ 0.92
ABCB1-204ENST00000476862 BFSP2Q13515 415 aa20.8■□□□□ 0.92
ABCB1-204ENST00000476862 VSIG10LQ86VR7 867 aa20.8■□□□□ 0.92
ABCB1-204ENST00000476862 NEK1Q96PY6 1258 aa20.8■□□□□ 0.92
ABCB1-204ENST00000476862 MLXIPQ9HAP2 919 aa20.8■□□□□ 0.92
ABCB1-204ENST00000476862 MSRAQ9UJ68 235 aa20.8■□□□□ 0.92
ABCB1-204ENST00000476862 NEFLP07196 543 aa20.79■□□□□ 0.92
ABCB1-204ENST00000476862 PFKMP08237 780 aa20.79■□□□□ 0.92
ABCB1-204ENST00000476862 ACTN1P12814 892 aa20.79■□□□□ 0.92
ABCB1-204ENST00000476862 KRT32Q14532 448 aa20.79■□□□□ 0.92
ABCB1-204ENST00000476862 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
ABCB1-204ENST00000476862 OTOP2Q7RTS6 562 aa20.79■□□□□ 0.92
ABCB1-204ENST00000476862 C7orf31Q8N865 590 aa20.79■□□□□ 0.92
ABCB1-204ENST00000476862 UMODL1Q5DID0 1318 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 ZBBXA8MT70 800 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 STAM2O75886 525 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 DNAJB2P25686 324 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 FGD1P98174 961 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 PTGISQ16647 500 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 PPTC7Q8NI37 304 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 HERVK_113Q902F9 699 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 EMID1Q96A84 441 aaPredicted RBP20.78■□□□□ 0.92
ABCB1-204ENST00000476862 TIFAQ96CG3 184 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 SCLYQ96I15 445 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 SPATA33Q96N06 139 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 GUCD1Q96NT3 240 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 CDX2Q99626 313 aaPredicted RBP20.78■□□□□ 0.92
ABCB1-204ENST00000476862 LRRC2Q9BYS8 371 aa20.78■□□□□ 0.92
ABCB1-204ENST00000476862 GGPS1O95749 300 aa20.77■□□□□ 0.92
ABCB1-204ENST00000476862 RXRAP19793 462 aa20.77■□□□□ 0.92
ABCB1-204ENST00000476862 RFC2P35250 354 aa20.77■□□□□ 0.92
ABCB1-204ENST00000476862 SLC35G1Q2M3R5 365 aa20.77■□□□□ 0.92
ABCB1-204ENST00000476862 DEFB128Q7Z7B8 93 aa20.77■□□□□ 0.92
ABCB1-204ENST00000476862 ALG1Q9BT22 464 aa20.77■□□□□ 0.92
ABCB1-204ENST00000476862 FTOQ9C0B1 505 aaKnown RBP eCLIP20.77■□□□□ 0.92
ABCB1-204ENST00000476862 SLC4A7Q9Y6M7 1214 aa20.77■□□□□ 0.92
ABCB1-204ENST00000476862 NOP56O00567 594 aaKnown RBP20.76■□□□□ 0.91
ABCB1-204ENST00000476862 SORBS3O60504 671 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 PPFIA4O75335 1185 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 PSEN2P49810 448 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 RAB30Q15771 203 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 CELF3Q5SZQ8 465 aaKnown RBP20.76■□□□□ 0.91
ABCB1-204ENST00000476862 SKAP1Q86WV1 359 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 MICU3Q86XE3 530 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 CCDC82Q8N4S0 544 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 SRBD1Q8N5C6 995 aaKnown RBP20.76■□□□□ 0.91
ABCB1-204ENST00000476862 FANCBQ8NB91 859 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 PPP1R13LQ8WUF5 828 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 WNT8AQ9H1J5 351 aa20.76■□□□□ 0.91
ABCB1-204ENST00000476862 RBM28Q9NW13 759 aaKnown RBP20.76■□□□□ 0.91
ABCB1-204ENST00000476862 PITPNM1O00562 1244 aa20.75■□□□□ 0.91
ABCB1-204ENST00000476862 PLEKHA8P1O95397 391 aa20.75■□□□□ 0.91
ABCB1-204ENST00000476862 HMGB1P09429 215 aaKnown RBP20.75■□□□□ 0.91
ABCB1-204ENST00000476862 NEDD9Q14511 834 aa20.75■□□□□ 0.91
ABCB1-204ENST00000476862 MYSM1Q5VVJ2 828 aa20.75■□□□□ 0.91
ABCB1-204ENST00000476862 DHX32Q7L7V1 743 aaKnown RBP20.75■□□□□ 0.91
ABCB1-204ENST00000476862 NLRX1Q86UT6 975 aa20.75■□□□□ 0.91
ABCB1-204ENST00000476862 RAB11FIP4Q86YS3 637 aa20.75■□□□□ 0.91
ABCB1-204ENST00000476862 CAGE1Q8TC20 777 aa20.75■□□□□ 0.91
ABCB1-204ENST00000476862 ZFP91Q96JP5 570 aaPredicted RBP20.75■□□□□ 0.91
ABCB1-204ENST00000476862 PSTPIP2Q9H939 334 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms