RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 FBXL7Q9UJT9 491 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 MKL2Q9ULH7 1088 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 CBLCQ9ULV8 474 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 CAPN6Q9Y6Q1 641 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.65□□□□□ -1.02
SMC5-202ENST00000471372 ZNF865P0CJ78 1059 aaPredicted RBP8.65□□□□□ -1.02
SMC5-202ENST00000471372 PF4V1P10720 104 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 SRFP11831 508 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 EEF1DP3Q658K8 133 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 FAM20CQ8IXL6 584 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 C2orf69Q8N8R5 385 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 C1orf162Q8NEQ5 155 aaPredicted RBP8.65□□□□□ -1.02
SMC5-202ENST00000471372 SLC5A5Q92911 643 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 DUSP15Q9H1R2 295 aaPredicted RBP8.65□□□□□ -1.02
SMC5-202ENST00000471372 KCNF1Q9H3M0 494 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 TCF7L1Q9HCS4 588 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 COMMD10Q9Y6G5 202 aa8.65□□□□□ -1.02
SMC5-202ENST00000471372 TGM5O43548 720 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 ZNF205O95201 554 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 PAMP19021 973 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 GRK2P25098 689 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 GRK3P35626 688 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 SESN3P58005 492 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 ST5P78524 1137 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 FAPQ12884 760 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 OS9Q13438 667 aaPredicted RBP8.64□□□□□ -1.03
SMC5-202ENST00000471372 ODF1Q14990 250 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 DDB1Q16531 1140 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 UVSSAQ2YD98 709 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 IQCEQ6IPM2 695 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 PAOXQ6QHF9 649 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 C22orf34Q6ZV56 151 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 MFSD4AQ8N468 514 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 CPA6Q8N4T0 437 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 SAMD3Q8N6K7 520 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 GIMAP7Q8NHV1 300 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 PIWIL2Q8TC59 973 aaKnown RBP8.64□□□□□ -1.03
SMC5-202ENST00000471372 TIFAQ96CG3 184 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 FAXDC2Q96IV6 333 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 MMP19Q99542 508 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 GPATCH2Q9NW75 528 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 ZBTB21Q9ULJ3 1066 aa8.64□□□□□ -1.03
SMC5-202ENST00000471372 NPHP3-ACAD11A0A0J9YXS1 232 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 WASH4PA8MWX3 477 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 LDHAP00338 332 aaKnown RBP8.63□□□□□ -1.03
SMC5-202ENST00000471372 SYPP08247 313 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 BRD3Q15059 726 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 BROXQ5VW32 411 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 PGM2L1Q6PCE3 622 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 C16orf59Q7L2K0 433 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 PNMA8AQ86V59 439 aaPredicted RBP8.63□□□□□ -1.03
SMC5-202ENST00000471372 CPNE8Q86YQ8 564 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 CMIPQ8IY22 773 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 USHBP1Q8N6Y0 703 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 MEGF10Q96KG7 1140 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 CATSPERZQ9NTU4 200 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 AP5S1Q9NUS5 200 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 NOP53Q9NZM5 478 aaKnown RBP8.63□□□□□ -1.03
SMC5-202ENST00000471372 ANKRD6Q9Y2G4 727 aa8.63□□□□□ -1.03
SMC5-202ENST00000471372 WASHC2AQ641Q2 1341 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 FAM47E-STBD1D6RA91 191 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 PIK3R2O00459 728 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 KRT37O76014 449 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 RECQLP46063 649 aaPredicted RBP8.62□□□□□ -1.03
SMC5-202ENST00000471372 TSHZ1Q6ZSZ6 1077 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 OTOP1Q7RTM1 612 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 DZIP1LQ8IYY4 767 aaKnown RBP8.62□□□□□ -1.03
SMC5-202ENST00000471372 EFHBQ8N7U6 833 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 USP33Q8TEY7 942 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 GATA6Q92908 595 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 KCNJ15Q99712 375 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 FOXP3Q9BZS1 431 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 GTF2IRD1Q9UHL9 959 aa8.62□□□□□ -1.03
SMC5-202ENST00000471372 GSTA4O15217 222 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 FGF10O15520 208 aaPredicted RBP8.61□□□□□ -1.03
SMC5-202ENST00000471372 PCDHGA12O60330 932 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 ITGB2P05107 769 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 SPATA31C1P0DKV0 1188 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 RBP3P10745 1247 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 ADMP35318 185 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 NRG1Q02297 640 aaPredicted RBP8.61□□□□□ -1.03
SMC5-202ENST00000471372 TMEM240Q5SV17 173 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 BEND4Q6ZU67 534 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 SVIPQ8NHG7 77 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 CHAMP1Q96JM3 812 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 PTCHD1Q96NR3 888 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 ZNF700Q9H0M5 742 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 MS4A5Q9H3V2 200 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 TCFL5Q9UL49 500 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 PNMA8BQ9ULN7 279 aaPredicted RBP8.61□□□□□ -1.03
SMC5-202ENST00000471372 PCDHGA9Q9Y5G4 932 aaKnown RBP8.61□□□□□ -1.03
SMC5-202ENST00000471372 PCDHGA8Q9Y5G5 932 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 PCDHGA7Q9Y5G6 932 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 PCDHGA6Q9Y5G7 932 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 PCDHGA3Q9Y5H0 932 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 PCDHGA2Q9Y5H1 932 aa8.61□□□□□ -1.03
SMC5-202ENST00000471372 C9orf172C9J069 976 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 IGF2BP3O00425 579 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMC5-202ENST00000471372 CREB3O43889 395 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms