RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 CREB3L3Q68CJ9 461 aa12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 DHX37Q8IY37 1157 aaKnown RBP12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 ZNF654Q8IZM8 581 aa12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 CTCFLQ8NI51 663 aaPredicted RBP12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 MYLIPQ8WY64 445 aa12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 WNT8AQ9H1J5 351 aa12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 LY9Q9HBG7 655 aa12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 MAP3K20Q9NYL2 800 aaKnown RBP12.32□□□□□ -0.44
TGFBR3-205ENST00000468996 LCTP09848 1927 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 DLL1O00548 723 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 MMP3P08254 477 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 RXRAP19793 462 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 PBX2P40425 430 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 LAMC2Q13753 1193 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 DGKDQ16760 1214 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 CENPQQ7L2Z9 268 aaPredicted RBP12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 VSIG10LQ86VR7 867 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 RAB11FIP4Q86YS3 637 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 CMTR1Q8N1G2 835 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 TMTC2Q8N394 836 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 HERVK_113Q902F9 699 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 TIFAQ96CG3 184 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 RRP36Q96EU6 259 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 PDCD2LQ9BRP1 358 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 LRRC2Q9BYS8 371 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 ZNF576Q9H609 170 aa12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
TGFBR3-205ENST00000468996 ZBBXA8MT70 800 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 CCND2P30279 289 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 PTPN11Q06124 597 aaPredicted RBP12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 GRIN2CQ14957 1233 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 PGM5Q15124 567 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 NECTIN1Q15223 517 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 PTGISQ16647 500 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 SAMD3Q8N6K7 520 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 C7orf31Q8N865 590 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 IL31RAQ8NI17 732 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 TMEM87BQ96K49 555 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 ALG1Q9BT22 464 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 PBX4Q9BYU1 374 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 FTOQ9C0B1 505 aaKnown RBP eCLIP12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 RTEL1Q9NZ71 1219 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 SEC63Q9UGP8 760 aaKnown RBP12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 MSRAQ9UJ68 235 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 SLC12A7Q9Y666 1083 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 SLC4A7Q9Y6M7 1214 aa12.3□□□□□ -0.44
TGFBR3-205ENST00000468996 LRRC37A2A6NM11 1700 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 SH2B2O14492 632 aaPredicted RBP12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 RGS20O76081 388 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 DDAH1O94760 285 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 PLEKHA8P1O95397 391 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 FOSL2P15408 326 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 GNAQP50148 359 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 SP2Q02086 613 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 GHRHRQ02643 423 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 BFSP2Q13515 415 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 COL9A3Q14050 684 aaPredicted RBP12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 BMP2KLQ5H9B9 411 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 RASIP1Q5U651 963 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 USP17L6PQ6QN14 398 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 SRBD1Q8N5C6 995 aaKnown RBP12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 SMARCC2Q8TAQ2 1214 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 KAT2BQ92831 832 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 CUL5Q93034 780 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 SPATA33Q96N06 139 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 MAP3K14Q99558 947 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 LZTS2Q9BRK4 669 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 MLXIPQ9HAP2 919 aa12.29□□□□□ -0.44
TGFBR3-205ENST00000468996 BAZ2BQ9UIF8 2168 aaKnown RBP12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 TMEM265A0A087WTH1 108 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 hCG_1642624A0A1W2PR95 340 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 PPFIA4O75335 1185 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 GGPS1O95749 300 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 IQCF3P0C7M6 154 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 ZNF286BP0CG31 522 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 PSEN2P49810 448 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 RABGGTBP53611 331 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 CELF3Q5SZQ8 465 aaKnown RBP12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 RNF20Q5VTR2 975 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 MYSM1Q5VVJ2 828 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 SYNE3Q6ZMZ3 975 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 MAFAQ8NHW3 353 aaPredicted RBP12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 PPTC7Q8NI37 304 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 GPKOWQ92917 476 aaPredicted RBP eCLIP12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 EMID1Q96A84 441 aaPredicted RBP12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 MTA3Q9BTC8 594 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 SPZ1Q9BXG8 430 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
TGFBR3-205ENST00000468996 CALM1P0DP23 149 aa12.27□□□□□ -0.45
TGFBR3-205ENST00000468996 CALM2P0DP24 149 aa12.27□□□□□ -0.45
TGFBR3-205ENST00000468996 CALM3P0DP25 149 aa12.27□□□□□ -0.45
TGFBR3-205ENST00000468996 TGFB3P10600 412 aa12.27□□□□□ -0.45
TGFBR3-205ENST00000468996 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms