RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 DAGLBQ8NCG7 672 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 DIS3LQ8TF46 1054 aaKnown RBP12.68□□□□□ -0.38
MSH5-212ENST00000467319 SCFD2Q8WU76 684 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 CRYGNQ8WXF5 182 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 INPP4AQ96PE3 977 aaPredicted RBP12.68□□□□□ -0.38
MSH5-212ENST00000467319 XPNPEP3Q9NQH7 507 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 ALPK3Q96L96 1907 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 EIF3JO75822 258 aaKnown RBP12.67□□□□□ -0.38
MSH5-212ENST00000467319 STAM2O75886 525 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 ARIH2O95376 493 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 TFRCP02786 760 aaKnown RBP12.67□□□□□ -0.38
MSH5-212ENST00000467319 PTGS1P23219 599 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 SREBF1P36956 1147 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 GJA9P57773 515 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 TNFAIP2Q03169 654 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 LRRC41Q15345 812 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 DUSP28Q4G0W2 176 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 IQSEC1Q6DN90 963 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 CCSAPQ6IQ19 270 aaPredicted RBP12.67□□□□□ -0.38
MSH5-212ENST00000467319 CCDC83Q8IWF9 413 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 REXO1Q8N1G1 1221 aaKnown RBP12.67□□□□□ -0.38
MSH5-212ENST00000467319 KLHDC9Q8NEP7 349 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
MSH5-212ENST00000467319 ANO3Q9BYT9 981 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 ORC3Q9UBD5 711 aaPredicted RBP12.67□□□□□ -0.38
MSH5-212ENST00000467319 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
MSH5-212ENST00000467319 MYADML2A6NDP7 307 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 SPDYE3A6NKU9 549 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 M0R2N6 131 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 DTNBO60941 627 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 PGK1P00558 417 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 FOSP01100 380 aaPredicted RBP12.66□□□□□ -0.38
MSH5-212ENST00000467319 GNA11P29992 359 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 MCM2P49736 904 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 GJC2Q5T442 439 aaPredicted RBP12.66□□□□□ -0.38
MSH5-212ENST00000467319 MCTP2Q6DN12 878 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 TLK2Q86UE8 772 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 WDR11Q9BZH6 1224 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 C6orf50Q9HD87 102 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 TMEM260Q9NX78 707 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 Q9Y3F1 56 aa12.66□□□□□ -0.38
MSH5-212ENST00000467319 MYH7BA7E2Y1 1941 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 NKRFO15226 690 aaKnown RBP eCLIP12.65□□□□□ -0.38
MSH5-212ENST00000467319 MYCLP12524 364 aaPredicted RBP12.65□□□□□ -0.38
MSH5-212ENST00000467319 ICAM3P32942 547 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.38
MSH5-212ENST00000467319 ARHGAP1Q07960 439 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 SEMA3FQ13275 785 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 GALNT17Q6IS24 598 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 ARRDC4Q8NCT1 418 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 BICD2Q8TD16 824 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 RASGRP4Q8TDF6 673 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 WASF1Q92558 559 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 EMID1Q96A84 441 aaPredicted RBP12.65□□□□□ -0.38
MSH5-212ENST00000467319 PAWRQ96IZ0 340 aaKnown RBP12.65□□□□□ -0.38
MSH5-212ENST00000467319 TMX3Q96JJ7 454 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 PHF20Q9BVI0 1012 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 EHMT1Q9H9B1 1298 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 PCDHA4Q9UN74 947 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 PHF24Q9UPV7 400 aa12.65□□□□□ -0.38
MSH5-212ENST00000467319 PDE4DIPQ5VU43 2346 aa12.65□□□□□ -0.39
MSH5-212ENST00000467319 KBTBD13C9JR72 458 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 FIBPO43427 364 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 TXNP10599 105 aaKnown RBP12.64□□□□□ -0.39
MSH5-212ENST00000467319 ITGB5P18084 799 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
MSH5-212ENST00000467319 ARHGAP4P98171 946 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 GNPTABQ3T906 1256 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 SEPT14Q6ZU15 432 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 NECAB2Q7Z6G3 386 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 RNF180Q86T96 592 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 GPRASP2Q96D09 838 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 TSEN34Q9BSV6 310 aaKnown RBP12.64□□□□□ -0.39
MSH5-212ENST00000467319 GJB4Q9NTQ9 266 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 DDX41Q9UJV9 622 aaKnown RBP12.64□□□□□ -0.39
MSH5-212ENST00000467319 UBIAD1Q9Y5Z9 338 aa12.64□□□□□ -0.39
MSH5-212ENST00000467319 SPATA31C2B4DYI2 1134 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 EDIL3O43854 480 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 CYP3A4P08684 503 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 C6orf222P0C671 652 aaPredicted RBP12.63□□□□□ -0.39
MSH5-212ENST00000467319 TGFB3P10600 412 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 HOXD8P13378 290 aaPredicted RBP12.63□□□□□ -0.39
MSH5-212ENST00000467319 NLRP5P59047 1200 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
MSH5-212ENST00000467319 SNX17Q15036 470 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 FSCN1Q16658 493 aaKnown RBP12.63□□□□□ -0.39
MSH5-212ENST00000467319 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 KCNV1Q6PIU1 500 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 BLIDQ8IZY5 108 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 COPS5Q92905 334 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 ZFP91Q96JP5 570 aaPredicted RBP12.63□□□□□ -0.39
MSH5-212ENST00000467319 C11orf49Q9H6J7 331 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 MRVI1Q9Y6F6 885 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 SCN10AQ9Y5Y9 1956 aa12.63□□□□□ -0.39
MSH5-212ENST00000467319 IGLV3-22A0A075B6J6 115 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms