RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 SORBS3O60504 671 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 RGS20O76081 388 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 GH1P01241 217 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 NR3C2P08235 984 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 MRPL12P52815 198 aaKnown RBP16.88■□□□□ 0.29
ALMS1-202ENST00000464408 ADGRE1Q14246 886 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 GRM4Q14833 912 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 HOMER1Q86YM7 354 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 IL31RAQ8NI17 732 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 PIGSQ96S52 555 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 IWS1Q96ST2 819 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 MSRAQ9UJ68 235 aa16.88■□□□□ 0.29
ALMS1-202ENST00000464408 DDX41Q9UJV9 622 aaKnown RBP16.88■□□□□ 0.29
ALMS1-202ENST00000464408 REV3LO60673 3130 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 IFIT3O14879 490 aaKnown RBP16.87■□□□□ 0.29
ALMS1-202ENST00000464408 SGSM2O43147 1006 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 CYTH3O43739 400 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 KPNA6O60684 536 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 ANTXR2P58335 489 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 GHRHRQ02643 423 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 COL9A3Q14050 684 aaPredicted RBP16.87■□□□□ 0.29
ALMS1-202ENST00000464408 RAB30Q15771 203 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 GDF6Q6KF10 455 aaPredicted RBP16.87■□□□□ 0.29
ALMS1-202ENST00000464408 RPUSD2Q8IZ73 545 aaKnown RBP16.87■□□□□ 0.29
ALMS1-202ENST00000464408 PPM1EQ8WY54 764 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 MAF1Q9H063 256 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 MTIF3Q9H2K0 278 aaKnown RBP16.87■□□□□ 0.29
ALMS1-202ENST00000464408 PCDHA1Q9Y5I3 950 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 SLC4A7Q9Y6M7 1214 aa16.87■□□□□ 0.29
ALMS1-202ENST00000464408 IQCF3P0C7M6 154 aa16.86■□□□□ 0.29
ALMS1-202ENST00000464408 ZNF286BP0CG31 522 aa16.86■□□□□ 0.29
ALMS1-202ENST00000464408 MYCLP12524 364 aaPredicted RBP16.86■□□□□ 0.29
ALMS1-202ENST00000464408 TRDNQ13061 729 aa16.86■□□□□ 0.29
ALMS1-202ENST00000464408 PTGISQ16647 500 aa16.86■□□□□ 0.29
ALMS1-202ENST00000464408 GPKOWQ92917 476 aaPredicted RBP eCLIP16.86■□□□□ 0.29
ALMS1-202ENST00000464408 PDCD2LQ9BRP1 358 aa16.86■□□□□ 0.29
ALMS1-202ENST00000464408 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
ALMS1-202ENST00000464408 EIF3JO75822 258 aaKnown RBP16.85■□□□□ 0.29
ALMS1-202ENST00000464408 ATP2A2P16615 1042 aaKnown RBP16.85■□□□□ 0.29
ALMS1-202ENST00000464408 PTPN11Q06124 597 aaPredicted RBP16.85■□□□□ 0.29
ALMS1-202ENST00000464408 TROAPQ12815 778 aa16.85■□□□□ 0.29
ALMS1-202ENST00000464408 WTAPQ15007 396 aa16.85■□□□□ 0.29
ALMS1-202ENST00000464408 RUFY2Q8WXA3 655 aa16.85■□□□□ 0.29
ALMS1-202ENST00000464408 PIBF1Q8WXW3 757 aa16.85■□□□□ 0.29
ALMS1-202ENST00000464408 DHX38Q92620 1227 aaKnown RBP16.85■□□□□ 0.29
ALMS1-202ENST00000464408 GAS2L1Q99501 681 aaPredicted RBP16.85■□□□□ 0.29
ALMS1-202ENST00000464408 RIOX1Q9H6W3 641 aa16.85■□□□□ 0.29
ALMS1-202ENST00000464408 MRVI1Q9Y6F6 885 aa16.85■□□□□ 0.29
ALMS1-202ENST00000464408 MUC3AQ02505 3323 aa16.85■□□□□ 0.29
ALMS1-202ENST00000464408 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 SP2Q02086 613 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 GPNMBQ14956 572 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 PGM5Q15124 567 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 CCDC85BQ15834 202 aaPredicted RBP16.84■□□□□ 0.29
ALMS1-202ENST00000464408 RALYLQ86SE5 291 aaKnown RBP16.84■□□□□ 0.29
ALMS1-202ENST00000464408 MB21D2Q8IYB1 491 aaPredicted RBP16.84■□□□□ 0.29
ALMS1-202ENST00000464408 NCOA7Q8NI08 942 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 ALG1Q9BT22 464 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 MYL10Q9BUA6 226 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 BCAS3Q9H6U6 928 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 SLC28A3Q9HAS3 691 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 NOD1Q9Y239 953 aa16.84■□□□□ 0.29
ALMS1-202ENST00000464408 RBM8AQ9Y5S9 174 aaKnown RBP16.84■□□□□ 0.29
ALMS1-202ENST00000464408 TRANK1O15050 2925 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 ARHGEF15O94989 841 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 PFKMP08237 780 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 CASTP20810 708 aaKnown RBP16.83■□□□□ 0.28
ALMS1-202ENST00000464408 PSEN2P49810 448 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 HIC1Q14526 733 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 DGKDQ16760 1214 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 TCTN1Q2MV58 587 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 PRRC2BQ5JSZ5 2229 aaKnown RBP16.83■□□□□ 0.28
ALMS1-202ENST00000464408 PPP2R2DQ66LE6 453 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 SESTD1Q86VW0 696 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 FCHSD1Q86WN1 690 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 SKAP1Q86WV1 359 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 RETREG2Q8NC44 543 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 MAP4K1Q92918 833 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 WNT8BQ93098 351 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.28
ALMS1-202ENST00000464408 HDAC6Q9UBN7 1215 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 PCDHA11Q9Y5I1 949 aa16.83■□□□□ 0.28
ALMS1-202ENST00000464408 ERICH2A1L162 156 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 GCOM1H8Y6P7 765 aaPredicted RBP16.82■□□□□ 0.28
ALMS1-202ENST00000464408 POLR2MP0CAP2 368 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 UBA1P22314 1058 aaKnown RBP16.82■□□□□ 0.28
ALMS1-202ENST00000464408 IGFBP4P22692 258 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 RFC2P35250 354 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 ZNF200P98182 395 aaPredicted RBP16.82■□□□□ 0.28
ALMS1-202ENST00000464408 BFSP2Q13515 415 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 LAMC2Q13753 1193 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 MFSD10Q14728 455 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 VSIG10LQ86VR7 867 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 DHX37Q8IY37 1157 aaKnown RBP16.82■□□□□ 0.28
ALMS1-202ENST00000464408 PPTC7Q8NI37 304 aa16.82■□□□□ 0.28
ALMS1-202ENST00000464408 FTOQ9C0B1 505 aaKnown RBP eCLIP16.82■□□□□ 0.28
ALMS1-202ENST00000464408 LY9Q9HBG7 655 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms