RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RUFY2Q8WXA3 655 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 MAP3K20Q9NYL2 800 aaKnown RBP17.9■□□□□ 0.46
SKA3-204ENST00000462482 KLRF2D3W0D1 207 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 BAIAP3O94812 1187 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 PARNO95453 639 aaKnown RBP17.89■□□□□ 0.45
SKA3-204ENST00000462482 MYOGP15173 224 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 KCNV1Q6PIU1 500 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 SESTD1Q86VW0 696 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 SAMD3Q8N6K7 520 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 ASB2Q96Q27 587 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 PRDM6Q9NQX0 595 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 PXMP2Q9NR77 195 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 COL20A1Q9P218 1284 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 PCDHA1Q9Y5I3 950 aa17.89■□□□□ 0.45
SKA3-204ENST00000462482 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
SKA3-204ENST00000462482 TNFRSF10AO00220 468 aa17.88■□□□□ 0.45
SKA3-204ENST00000462482 ZBTB5O15062 677 aa17.88■□□□□ 0.45
SKA3-204ENST00000462482 CA3P07451 260 aa17.88■□□□□ 0.45
SKA3-204ENST00000462482 MYCLP12524 364 aaPredicted RBP17.88■□□□□ 0.45
SKA3-204ENST00000462482 SART3Q15020 963 aaKnown RBP17.88■□□□□ 0.45
SKA3-204ENST00000462482 SKIV2LQ15477 1246 aaKnown RBP17.88■□□□□ 0.45
SKA3-204ENST00000462482 RALYLQ86SE5 291 aaKnown RBP17.88■□□□□ 0.45
SKA3-204ENST00000462482 DDX41Q9UJV9 622 aaKnown RBP17.88■□□□□ 0.45
SKA3-204ENST00000462482 SELPP16109 830 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 PSEN2P49810 448 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 HSD17B4P51659 736 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 AAK1Q2M2I8 961 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 HOMER1Q86YM7 354 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 HERC6Q8IVU3 1022 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 STAG2Q8N3U4 1231 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 PPTC7Q8NI37 304 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 EMID1Q96A84 441 aaPredicted RBP17.87■□□□□ 0.45
SKA3-204ENST00000462482 VWCEQ96DN2 955 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 ALG1Q9BT22 464 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 ZBED2Q9BTP6 218 aa17.87■□□□□ 0.45
SKA3-204ENST00000462482 IFIT3O14879 490 aaKnown RBP17.86■□□□□ 0.45
SKA3-204ENST00000462482 MFSD10Q14728 455 aa17.86■□□□□ 0.45
SKA3-204ENST00000462482 GDF6Q6KF10 455 aaPredicted RBP17.86■□□□□ 0.45
SKA3-204ENST00000462482 LRRC8DQ7L1W4 858 aa17.86■□□□□ 0.45
SKA3-204ENST00000462482 KAT2BQ92831 832 aa17.86■□□□□ 0.45
SKA3-204ENST00000462482 PDCD2LQ9BRP1 358 aa17.86■□□□□ 0.45
SKA3-204ENST00000462482 GTF2IRD1Q9UHL9 959 aa17.86■□□□□ 0.45
SKA3-204ENST00000462482 UNC80Q8N2C7 3258 aa17.85■□□□□ 0.45
SKA3-204ENST00000462482 GCOM1H8Y6P7 765 aaPredicted RBP17.85■□□□□ 0.45
SKA3-204ENST00000462482 TLL1O43897 1013 aa17.85■□□□□ 0.45
SKA3-204ENST00000462482 POLR2MP0CAP2 368 aa17.85■□□□□ 0.45
SKA3-204ENST00000462482 CCND2P30279 289 aa17.85■□□□□ 0.45
SKA3-204ENST00000462482 SEC23AQ15436 765 aa17.85■□□□□ 0.45
SKA3-204ENST00000462482 KIAA0753Q2KHM9 967 aa17.85■□□□□ 0.45
SKA3-204ENST00000462482 MAD2L2Q9UI95 211 aa17.85■□□□□ 0.45
SKA3-204ENST00000462482 PALM3A6NDB9 673 aaPredicted RBP17.84■□□□□ 0.45
SKA3-204ENST00000462482 EFCAB14O75071 495 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 PPFIA4O75335 1185 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 HOXA13P31271 388 aaPredicted RBP17.84■□□□□ 0.45
SKA3-204ENST00000462482 GHRHRQ02643 423 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 PTK7Q13308 1070 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 WTAPQ15007 396 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 TTC22Q5TAA0 569 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 CNKSR3Q6P9H4 555 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 STOX1Q6ZVD7 989 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 ADAMTS19Q8TE59 1207 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 ARNTL2Q8WYA1 636 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 SPATA33Q96N06 139 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 CERS4Q9HA82 394 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 MLXIPQ9HAP2 919 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 HDAC6Q9UBN7 1215 aa17.84■□□□□ 0.45
SKA3-204ENST00000462482 LCTP09848 1927 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 GGPS1O95749 300 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 F2P00734 622 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 ZNF286BP0CG31 522 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 TGFB3P10600 412 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 CKBP12277 381 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 GRM4Q14833 912 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 GNPTABQ3T906 1256 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 CELF3Q5SZQ8 465 aaKnown RBP17.83■□□□□ 0.44
SKA3-204ENST00000462482 CATIPQ7Z7H3 387 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 VSIG10LQ86VR7 867 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 FCHSD1Q86WN1 690 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 NCOA7Q8NI08 942 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 MTMR8Q96EF0 704 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 PIGSQ96S52 555 aa17.83■□□□□ 0.44
SKA3-204ENST00000462482 UHRF1Q96T88 793 aaPredicted RBP17.83■□□□□ 0.44
SKA3-204ENST00000462482 PNMA6FA0A0J9YX94 578 aa17.82■□□□□ 0.44
SKA3-204ENST00000462482 ABHD14A-ACY1A0A1B0GW23 586 aa17.82■□□□□ 0.44
SKA3-204ENST00000462482 WDR5P61964 334 aaKnown RBP17.82■□□□□ 0.44
SKA3-204ENST00000462482 TAP1Q03518 808 aa17.82■□□□□ 0.44
SKA3-204ENST00000462482 RBL2Q08999 1139 aa17.82■□□□□ 0.44
SKA3-204ENST00000462482 IKBKEQ14164 716 aa17.82■□□□□ 0.44
SKA3-204ENST00000462482 PGM5Q15124 567 aa17.82■□□□□ 0.44
SKA3-204ENST00000462482 MYSM1Q5VVJ2 828 aa17.82■□□□□ 0.44
SKA3-204ENST00000462482 RFXAPO00287 272 aa17.81■□□□□ 0.44
SKA3-204ENST00000462482 NOP56O00567 594 aaKnown RBP17.81■□□□□ 0.44
SKA3-204ENST00000462482 OPLAHO14841 1288 aa17.81■□□□□ 0.44
SKA3-204ENST00000462482 SORBS3O60504 671 aa17.81■□□□□ 0.44
SKA3-204ENST00000462482 PPP1R11O60927 126 aaPredicted RBP17.81■□□□□ 0.44
SKA3-204ENST00000462482 POU3F3P20264 500 aaPredicted RBP17.81■□□□□ 0.44
SKA3-204ENST00000462482 DHX38Q92620 1227 aaKnown RBP17.81■□□□□ 0.44
SKA3-204ENST00000462482 RIOX1Q9H6W3 641 aa17.81■□□□□ 0.44
SKA3-204ENST00000462482 MTCH2Q9Y6C9 303 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms