RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 NGLY1Q96IV0 654 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 NT5C3AQ9H0P0 336 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 PACSIN2Q9UNF0 486 aaPredicted RBP15.89■□□□□ 0.13
NCL-207ENST00000461347 H2AFZP0C0S5 128 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 BTDP43251 543 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 ALS2CLQ60I27 953 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 H2AFVQ71UI9 128 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 CELF1Q92879 486 aaKnown RBP15.88■□□□□ 0.13
NCL-207ENST00000461347 TRIM9Q9C026 710 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 KCNK9Q9NPC2 374 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 DDX25Q9UHL0 483 aaKnown RBP15.88■□□□□ 0.13
NCL-207ENST00000461347 DNM3Q9UQ16 869 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 PSMD14O00487 310 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 SRGNP10124 158 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 ARHGAP44Q17R89 818 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 NT5DC1Q5TFE4 455 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 FAM237AA0A1B0GTK4 181 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 PALMO75781 387 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 NR2F2P24468 414 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 APBA1Q02410 837 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 MFSD14BQ5SR56 506 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 RDH13Q8NBN7 331 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 MINPP1Q9UNW1 487 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 CNTNAP5Q8WYK1 1306 aa15.88■□□□□ 0.13
NCL-207ENST00000461347 FAM208AQ9UK61 1670 aaKnown RBP15.88■□□□□ 0.13
NCL-207ENST00000461347 GNA14O95837 355 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 CACNA2D3Q8IZS8 1091 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 HSD3B7Q9H2F3 369 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 VIPAS39Q9H9C1 493 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 STK17AQ9UEE5 414 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 TARSL2A2RTX5 802 aaKnown RBP15.87■□□□□ 0.13
NCL-207ENST00000461347 KCNB1Q14721 858 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 TMEM47Q9BQJ4 181 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 AP1M1Q9BXS5 423 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.87■□□□□ 0.137e-8■■■□□ 15.9
NCL-207ENST00000461347 LCMT1Q9UIC8 334 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 AMFRQ9UKV5 643 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 SMIM22K7EJ46 135 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 CYP4A11Q02928 519 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 MTMR3Q13615 1198 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
NCL-207ENST00000461347 CNBD1Q8NA66 436 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 DDX12PQ92771 950 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 GJA10Q969M2 543 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 PSTPIP2Q9H939 334 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 EHD2Q9NZN4 543 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 CTTNBP2NLQ9P2B4 639 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 BAIAP2L1Q9UHR4 511 aa15.87■□□□□ 0.13
NCL-207ENST00000461347 TCRBV5S4A2TA0A5A2 114 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 CALUO43852 315 aaPredicted RBP15.86■□□□□ 0.13
NCL-207ENST00000461347 ABL1P00519 1130 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 PLEKP08567 350 aaPredicted RBP15.86■□□□□ 0.13
NCL-207ENST00000461347 STAT1P42224 750 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 SLC1A4P43007 532 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 CALCOCO2Q13137 446 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 PPP1R7Q15435 360 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 EXOC3L4Q17RC7 722 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 USH1GQ495M9 461 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 ZC3H12CQ9C0D7 883 aaKnown RBP15.86■□□□□ 0.13
NCL-207ENST00000461347 RIC8AQ9NPQ8 531 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 TNS3Q68CZ2 1445 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 FOXP2O15409 715 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 GJC1P36383 396 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 FOXR1Q6PIV2 292 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 TRAPPC11Q7Z392 1133 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 MS4A14Q96JA4 679 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 FAM84BQ96KN1 310 aaPredicted RBP15.86■□□□□ 0.13
NCL-207ENST00000461347 RAB21Q9UL25 225 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 SPOPO43791 374 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 CETN2P41208 172 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 PKN1Q16512 942 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 UBE2SQ16763 222 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 GRIPAP1Q4V328 841 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 DPP8Q6V1X1 898 aaPredicted RBP15.86■□□□□ 0.13
NCL-207ENST00000461347 LRP10Q7Z4F1 713 aa15.86■□□□□ 0.13
NCL-207ENST00000461347 BSDC1Q9NW68 430 aaPredicted RBP15.86■□□□□ 0.13
NCL-207ENST00000461347 LRRC63Q05C16 580 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 PABPC4Q13310 644 aaKnown RBP eCLIP15.85■□□□□ 0.137e-24■■□□□ 11.5
NCL-207ENST00000461347 LRRC31Q6UY01 552 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 MMS22LQ6ZRQ5 1243 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 UNC13DQ70J99 1090 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 MAEAQ7L5Y9 396 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 HOOK3Q86VS8 718 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 NAP1L3Q99457 506 aaPredicted RBP15.85■□□□□ 0.13
NCL-207ENST00000461347 FRMD4BQ9Y2L6 1034 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 RHOBTB3O94955 611 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 SERPING1P05155 500 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 TNIP1Q15025 636 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 PRR16Q569H4 304 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 SYCE1Q8N0S2 351 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 PLVAPQ9BX97 442 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 CCSER1Q9C0I3 900 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 SH3GLB2Q9NR46 395 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 TMEM260Q9NX78 707 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 RNF14Q9UBS8 474 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 A0A1W2PRG0 241 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 SLC16A2P36021 539 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 SEC23AQ15436 765 aa15.85■□□□□ 0.13
NCL-207ENST00000461347 WDR93Q6P2C0 686 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms