RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 FOSP01100 380 aaPredicted RBP16.85■□□□□ 0.29
CLCN1-203ENST00000455478 CCND2P30279 289 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 LRRC41Q15345 812 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 GJC2Q5T442 439 aaPredicted RBP16.85■□□□□ 0.29
CLCN1-203ENST00000455478 CCDC62Q6P9F0 684 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 SEPT14Q6ZU15 432 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 ARRDC4Q8NCT1 418 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 CCDC148Q8NFR7 591 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 DIS3LQ8TF46 1054 aaKnown RBP16.85■□□□□ 0.29
CLCN1-203ENST00000455478 SCFD2Q8WU76 684 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 UPF3AQ9H1J1 476 aaKnown RBP16.85■□□□□ 0.29
CLCN1-203ENST00000455478 MKI67P46013 3256 aaKnown RBP16.85■□□□□ 0.29
CLCN1-203ENST00000455478 SYNRGQ9UMZ2 1314 aa16.85■□□□□ 0.29
CLCN1-203ENST00000455478 SPDYE3A6NKU9 549 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 CTAGE5O15320 804 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 ARIH2O95376 493 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 GNA11P29992 359 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 GJA9P57773 515 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 IRX5P78411 483 aaPredicted RBP16.84■□□□□ 0.29
CLCN1-203ENST00000455478 JAKMIP3Q5VZ66 844 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 PCNX4Q63HM2 1172 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 XRRA1Q6P2D8 792 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 FAM177A1Q8N128 213 aaPredicted RBP16.84■□□□□ 0.29
CLCN1-203ENST00000455478 PAWRQ96IZ0 340 aaKnown RBP16.84■□□□□ 0.29
CLCN1-203ENST00000455478 PGBD1Q96JS3 809 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 LLPHQ9BRT6 129 aaKnown RBP16.84■□□□□ 0.29
CLCN1-203ENST00000455478 Q9Y3F1 56 aa16.84■□□□□ 0.29
CLCN1-203ENST00000455478 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 DYNC1LI2O43237 492 aaPredicted RBP16.83■□□□□ 0.28
CLCN1-203ENST00000455478 TXNP10599 105 aaKnown RBP16.83■□□□□ 0.28
CLCN1-203ENST00000455478 COL6A1P12109 1028 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 MCM2P49736 904 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 NLRP5P59047 1200 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 NKX3-2P78367 333 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 AP3B2Q13367 1082 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 NPY5RQ15761 445 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 CCSAPQ6IQ19 270 aaPredicted RBP16.83■□□□□ 0.28
CLCN1-203ENST00000455478 KLHDC9Q8NEP7 349 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 TMX3Q96JJ7 454 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 ALG1Q9BT22 464 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 GJB4Q9NTQ9 266 aa16.83■□□□□ 0.28
CLCN1-203ENST00000455478 DNM1LO00429 736 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 STAM2O75886 525 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
CLCN1-203ENST00000455478 TTLL4Q14679 1199 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 LY6KQ17RY6 165 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 MCTP2Q6DN12 878 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 RNF180Q86T96 592 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 REXO1Q8N1G1 1221 aaKnown RBP16.82■□□□□ 0.28
CLCN1-203ENST00000455478 BICD2Q8TD16 824 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 RASGRP4Q8TDF6 673 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 WASF1Q92558 559 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 COPS5Q92905 334 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 INPP4AQ96PE3 977 aaPredicted RBP16.82■□□□□ 0.28
CLCN1-203ENST00000455478 PHF20Q9BVI0 1012 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 ANO3Q9BYT9 981 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
CLCN1-203ENST00000455478 PCDHA4Q9UN74 947 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 KCNJ14Q9UNX9 436 aa16.82■□□□□ 0.28
CLCN1-203ENST00000455478 M0R2N6 131 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 NKRFO15226 690 aaKnown RBP eCLIP16.81■□□□□ 0.28
CLCN1-203ENST00000455478 C6orf222P0C671 652 aaPredicted RBP16.81■□□□□ 0.28
CLCN1-203ENST00000455478 CST5P28325 142 aaPredicted RBP16.81■□□□□ 0.28
CLCN1-203ENST00000455478 SREBF1P36956 1147 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 GALNT17Q6IS24 598 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 NECAB2Q7Z6G3 386 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 BLIDQ8IZY5 108 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 DAGLBQ8NCG7 672 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 CRYGNQ8WXF5 182 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 AP5M1Q9H0R1 490 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 EHMT1Q9H9B1 1298 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 UBIAD1Q9Y5Z9 338 aa16.81■□□□□ 0.28
CLCN1-203ENST00000455478 SPATA31C2B4DYI2 1134 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 KBTBD13C9JR72 458 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 TNRC18O15417 2968 aaPredicted RBP16.8■□□□□ 0.28
CLCN1-203ENST00000455478 TGFB3P10600 412 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 ITGB5P18084 799 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 ICAM3P32942 547 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 BEX3Q00994 111 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 SP2Q02086 613 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 SEMA3FQ13275 785 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 KCNA10Q16322 511 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 TSEN34Q9BSV6 310 aaKnown RBP16.8■□□□□ 0.28
CLCN1-203ENST00000455478 C11orf49Q9H6J7 331 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 PHF24Q9UPV7 400 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 MYH7BA7E2Y1 1941 aa16.8■□□□□ 0.28
CLCN1-203ENST00000455478 EDIL3O43854 480 aa16.79■□□□□ 0.28
CLCN1-203ENST00000455478 XBP1P17861 261 aa16.79■□□□□ 0.28
CLCN1-203ENST00000455478 ARHGAP4P98171 946 aa16.79■□□□□ 0.28
CLCN1-203ENST00000455478 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
CLCN1-203ENST00000455478 FSCN1Q16658 493 aaKnown RBP16.79■□□□□ 0.28
CLCN1-203ENST00000455478 GNPTABQ3T906 1256 aa16.79■□□□□ 0.28
CLCN1-203ENST00000455478 GNASQ5JWF2 1037 aa16.79■□□□□ 0.28
CLCN1-203ENST00000455478 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
CLCN1-203ENST00000455478 OR6J1Q8NGC5 347 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms