RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 DGKDQ16760 1214 aa25.4■■□□□ 1.66
CPSF7-208ENST00000450000 KCNV1Q6PIU1 500 aa25.4■■□□□ 1.66
CPSF7-208ENST00000450000 DHX37Q8IY37 1157 aaKnown RBP25.4■■□□□ 1.66
CPSF7-208ENST00000450000 LZTS2Q9BRK4 669 aa25.4■■□□□ 1.66
CPSF7-208ENST00000450000 PDCD2LQ9BRP1 358 aa25.4■■□□□ 1.66
CPSF7-208ENST00000450000 LSG1Q9H089 658 aaKnown RBP25.4■■□□□ 1.66
CPSF7-208ENST00000450000 UMODL1Q5DID0 1318 aa25.39■■□□□ 1.66
CPSF7-208ENST00000450000 SLC27A2O14975 620 aa25.39■■□□□ 1.66
CPSF7-208ENST00000450000 MMP3P08254 477 aa25.39■■□□□ 1.66
CPSF7-208ENST00000450000 DNAJB2P25686 324 aa25.39■■□□□ 1.66
CPSF7-208ENST00000450000 C16orf59Q7L2K0 433 aa25.39■■□□□ 1.66
CPSF7-208ENST00000450000 CUL5Q93034 780 aa25.39■■□□□ 1.66
CPSF7-208ENST00000450000 TIFAQ96CG3 184 aa25.39■■□□□ 1.66
CPSF7-208ENST00000450000 MAP3K14Q99558 947 aa25.39■■□□□ 1.66
CPSF7-208ENST00000450000 DDX41Q9UJV9 622 aaKnown RBP25.39■■□□□ 1.66
CPSF7-208ENST00000450000 ZBBXA8MT70 800 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 CALM1P0DP23 149 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 CALM2P0DP24 149 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 CALM3P0DP25 149 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 ARHGAP1Q07960 439 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 BMP2KLQ5H9B9 411 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 CREB3L3Q68CJ9 461 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 SYNE3Q6ZMZ3 975 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 OTOP2Q7RTS6 562 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 CCDC155Q8N6L0 562 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 HERVK_113Q902F9 699 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 MYL10Q9BUA6 226 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 LY9Q9HBG7 655 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 MSRAQ9UJ68 235 aa25.38■■□□□ 1.65
CPSF7-208ENST00000450000 OPLAHO14841 1288 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 CYTH3O43739 400 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 GHRHRQ02643 423 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 BFSP2Q13515 415 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 PGM5Q15124 567 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 SMARCC2Q8TAQ2 1214 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 SCLYQ96I15 445 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 KATNAL1Q9BW62 490 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 SLC12A7Q9Y666 1083 aa25.37■■□□□ 1.65
CPSF7-208ENST00000450000 PFKMP08237 780 aa25.36■■□□□ 1.65
CPSF7-208ENST00000450000 FOSL2P15408 326 aa25.36■■□□□ 1.65
CPSF7-208ENST00000450000 GNPTABQ3T906 1256 aa25.36■■□□□ 1.65
CPSF7-208ENST00000450000 C7orf31Q8N865 590 aa25.36■■□□□ 1.65
CPSF7-208ENST00000450000 PPP1R13LQ8WUF5 828 aa25.36■■□□□ 1.65
CPSF7-208ENST00000450000 WNT8AQ9H1J5 351 aa25.36■■□□□ 1.65
CPSF7-208ENST00000450000 TTYH1Q9H313 450 aaPredicted RBP25.36■■□□□ 1.65
CPSF7-208ENST00000450000 ACTN1P12814 892 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 RAB30Q15771 203 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 PTGISQ16647 500 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 DEFB128Q7Z7B8 93 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 VSIG10LQ86VR7 867 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 MYLIPQ8WY64 445 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 SPZ1Q9BXG8 430 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 MLXIPQ9HAP2 919 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 SLC4A7Q9Y6M7 1214 aa25.35■■□□□ 1.65
CPSF7-208ENST00000450000 SH2B2O14492 632 aaPredicted RBP25.34■■□□□ 1.65
CPSF7-208ENST00000450000 SMARCA1P28370 1054 aa25.34■■□□□ 1.65
CPSF7-208ENST00000450000 SLC35G1Q2M3R5 365 aa25.34■■□□□ 1.65
CPSF7-208ENST00000450000 PPTC7Q8NI37 304 aa25.34■■□□□ 1.65
CPSF7-208ENST00000450000 EMID1Q96A84 441 aaPredicted RBP25.34■■□□□ 1.65
CPSF7-208ENST00000450000 SPATA33Q96N06 139 aa25.34■■□□□ 1.65
CPSF7-208ENST00000450000 ALG1Q9BT22 464 aa25.34■■□□□ 1.65
CPSF7-208ENST00000450000 FTOQ9C0B1 505 aaKnown RBP eCLIP25.34■■□□□ 1.65
CPSF7-208ENST00000450000 ZNF576Q9H609 170 aa25.34■■□□□ 1.65
CPSF7-208ENST00000450000 GRXCR1A8MXD5 290 aa25.33■■□□□ 1.65
CPSF7-208ENST00000450000 SORBS3O60504 671 aa25.33■■□□□ 1.65
CPSF7-208ENST00000450000 TGFB3P10600 412 aa25.33■■□□□ 1.65
CPSF7-208ENST00000450000 RFC2P35250 354 aa25.33■■□□□ 1.65
CPSF7-208ENST00000450000 LIFRP42702 1097 aa25.33■■□□□ 1.65
CPSF7-208ENST00000450000 NECTIN1Q15223 517 aa25.33■■□□□ 1.65
CPSF7-208ENST00000450000 RASIP1Q5U651 963 aa25.33■■□□□ 1.65
CPSF7-208ENST00000450000 PBX4Q9BYU1 374 aa25.33■■□□□ 1.65
CPSF7-208ENST00000450000 MYH6P13533 1939 aa25.32■■□□□ 1.64
CPSF7-208ENST00000450000 PITPNM1O00562 1244 aa25.32■■□□□ 1.64
CPSF7-208ENST00000450000 GGPS1O95749 300 aa25.32■■□□□ 1.64
CPSF7-208ENST00000450000 MAFAQ8NHW3 353 aaPredicted RBP25.32■■□□□ 1.64
CPSF7-208ENST00000450000 CDC45O75419 566 aa25.31■■□□□ 1.64
CPSF7-208ENST00000450000 STAM2O75886 525 aa25.31■■□□□ 1.64
CPSF7-208ENST00000450000 RXRAP19793 462 aa25.31■■□□□ 1.64
CPSF7-208ENST00000450000 PSEN2P49810 448 aa25.31■■□□□ 1.64
CPSF7-208ENST00000450000 CELF3Q5SZQ8 465 aaKnown RBP25.31■■□□□ 1.64
CPSF7-208ENST00000450000 CCDC136Q96JN2 1154 aa25.31■■□□□ 1.64
CPSF7-208ENST00000450000 ZFP91Q96JP5 570 aaPredicted RBP25.31■■□□□ 1.64
CPSF7-208ENST00000450000 LRRC2Q9BYS8 371 aa25.31■■□□□ 1.64
CPSF7-208ENST00000450000 CXXC1Q9P0U4 656 aaPredicted RBP25.31■■□□□ 1.64
CPSF7-208ENST00000450000 DLL1O00548 723 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 NOP56O00567 594 aaKnown RBP25.3■■□□□ 1.64
CPSF7-208ENST00000450000 PPFIA4O75335 1185 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 ZNF286BP0CG31 522 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 PBX2P40425 430 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 MFSD10Q14728 455 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 MYSM1Q5VVJ2 828 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 IL31RAQ8NI17 732 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 CAGE1Q8TC20 777 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 NEK1Q96PY6 1258 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 GAS2L1Q99501 681 aaPredicted RBP25.3■■□□□ 1.64
CPSF7-208ENST00000450000 SLC28A3Q9HAS3 691 aa25.3■■□□□ 1.64
CPSF7-208ENST00000450000 PLEKHA8P1O95397 391 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 IQCF3P0C7M6 154 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 GRIN2CQ14957 1233 aa25.29■■□□□ 1.64
CPSF7-208ENST00000450000 KIAA0753Q2KHM9 967 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms