RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 SYTL5Q8TDW5 730 aaPredicted RBP8.02□□□□□ -1.13
PBRM1-216ENST00000449505 EMID1Q96A84 441 aaPredicted RBP8.02□□□□□ -1.13
PBRM1-216ENST00000449505 SCLYQ96I15 445 aa8.02□□□□□ -1.13
PBRM1-216ENST00000449505 FTOQ9C0B1 505 aaKnown RBP eCLIP8.02□□□□□ -1.13
PBRM1-216ENST00000449505 UBA5Q9GZZ9 404 aa8.02□□□□□ -1.13
PBRM1-216ENST00000449505 NKX2-4Q9H2Z4 354 aa8.02□□□□□ -1.13
PBRM1-216ENST00000449505 CXXC1Q9P0U4 656 aaPredicted RBP8.02□□□□□ -1.13
PBRM1-216ENST00000449505 DDX49Q9Y6V7 483 aaKnown RBP8.02□□□□□ -1.13
PBRM1-216ENST00000449505 GBF1Q92538 1859 aa8.02□□□□□ -1.13
PBRM1-216ENST00000449505 TRANK1O15050 2925 aa8.02□□□□□ -1.13
PBRM1-216ENST00000449505 GRXCR1A8MXD5 290 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 KLRF2D3W0D1 207 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 STAM2O75886 525 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 F2P00734 622 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 EIF2AK2P19525 551 aaKnown RBP8.01□□□□□ -1.13
PBRM1-216ENST00000449505 IGFBP4P22692 258 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 HSD17B4P51659 736 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 CHMP4BP1P59074 171 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 ARHGAP1Q07960 439 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 PTGISQ16647 500 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 TTC22Q5TAA0 569 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 CCDC62Q6P9F0 684 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 SEPT14Q6ZU15 432 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 DEFB128Q7Z7B8 93 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 DHX37Q8IY37 1157 aaKnown RBP8.01□□□□□ -1.13
PBRM1-216ENST00000449505 PPTC7Q8NI37 304 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 AFG1LQ8WV93 481 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 JMJD4Q9H9V9 463 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 PXMP2Q9NR77 195 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 ZSWIM5Q9P217 1185 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 PCDHA1Q9Y5I3 950 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 EMSYQ7Z589 1322 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 CHD7Q9P2D1 2997 aa8.01□□□□□ -1.13
PBRM1-216ENST00000449505 GCOM1H8Y6P7 765 aaPredicted RBP8□□□□□ -1.13
PBRM1-216ENST00000449505 IFIT3O14879 490 aaKnown RBP8□□□□□ -1.13
PBRM1-216ENST00000449505 ARIH2O95376 493 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 NR3C2P08235 984 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 IQCF3P0C7M6 154 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 POLR2MP0CAP2 368 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 TGFB3P10600 412 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 SELPP16109 830 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 PTGS1P23219 599 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 CCND2P30279 289 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 KIF5BP33176 963 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 MRPS5P82675 430 aaKnown RBP8□□□□□ -1.13
PBRM1-216ENST00000449505 RBL2Q08999 1139 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 WTAPQ15007 396 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 TMEM63BQ5T3F8 832 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 LRRC8DQ7L1W4 858 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 CHST3Q7LGC8 479 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 CATIPQ7Z7H3 387 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 HOMER1Q86YM7 354 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 NCOA7Q8NI08 942 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 EXOC6Q8TAG9 804 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 COPS5Q92905 334 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 TAAR1Q96RJ0 339 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 CPVLQ9H3G5 476 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 VAT1LQ9HCJ6 419 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 SEC63Q9UGP8 760 aaKnown RBP8□□□□□ -1.13
PBRM1-216ENST00000449505 GTF2IRD1Q9UHL9 959 aa8□□□□□ -1.13
PBRM1-216ENST00000449505 YBX2Q9Y2T7 364 aaKnown RBP8□□□□□ -1.13
PBRM1-216ENST00000449505 TNFRSF10AO00220 468 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 NOP56O00567 594 aaKnown RBP7.99□□□□□ -1.13
PBRM1-216ENST00000449505 TLL1O43897 1013 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 CAND2O75155 1236 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 IGHDP01880 384 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 CA3P07451 260 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 PSEN2P49810 448 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 PTK7Q13308 1070 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 MYO9BQ13459 2157 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 MFSD10Q14728 455 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 GRM4Q14833 912 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 SEC23AQ15436 765 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 LY6KQ17RY6 165 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 CNKSR3Q6P9H4 555 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 STOX1Q6ZVD7 989 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 HERC6Q8IVU3 1022 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 USP38Q8NB14 1042 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 CTCFLQ8NI51 663 aaPredicted RBP7.99□□□□□ -1.13
PBRM1-216ENST00000449505 PPM1EQ8WY54 764 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 CUL5Q93034 780 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 MTMR8Q96EF0 704 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 PDCD2LQ9BRP1 358 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 MTA3Q9BTC8 594 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 ZBED2Q9BTP6 218 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 DDX41Q9UJV9 622 aaKnown RBP7.99□□□□□ -1.13
PBRM1-216ENST00000449505 ZNF215Q9UL58 517 aaPredicted RBP7.99□□□□□ -1.13
PBRM1-216ENST00000449505 NCOR1O75376 2440 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 BDP1A6H8Y1 2624 aa7.99□□□□□ -1.13
PBRM1-216ENST00000449505 PNMA6FA0A0J9YX94 578 aa7.98□□□□□ -1.13
PBRM1-216ENST00000449505 ABHD14A-ACY1A0A1B0GW23 586 aa7.98□□□□□ -1.13
PBRM1-216ENST00000449505 PALM3A6NDB9 673 aaPredicted RBP7.98□□□□□ -1.13
PBRM1-216ENST00000449505 PPFIA4O75335 1185 aa7.98□□□□□ -1.13
PBRM1-216ENST00000449505 DDAH1O94760 285 aa7.98□□□□□ -1.13
PBRM1-216ENST00000449505 GGPS1O95749 300 aa7.98□□□□□ -1.13
PBRM1-216ENST00000449505 GNAT1P11488 350 aa7.98□□□□□ -1.13
PBRM1-216ENST00000449505 MYCLP12524 364 aaPredicted RBP7.98□□□□□ -1.13
PBRM1-216ENST00000449505 HOXD8P13378 290 aaPredicted RBP7.98□□□□□ -1.13
PBRM1-216ENST00000449505 GNAQP50148 359 aa7.98□□□□□ -1.13
PBRM1-216ENST00000449505 RABGGTBP53611 331 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms