RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 TFAP4Q01664 338 aa16.76■□□□□ 0.27
CHFR-204ENST00000443047 FAM153CQ494X1 144 aa16.76■□□□□ 0.27
CHFR-204ENST00000443047 MAPKAPK5Q8IW41 473 aa16.76■□□□□ 0.27
CHFR-204ENST00000443047 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
CHFR-204ENST00000443047 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
CHFR-204ENST00000443047 MICAL1Q8TDZ2 1067 aa16.76■□□□□ 0.27
CHFR-204ENST00000443047 GPKOWQ92917 476 aaPredicted RBP eCLIP16.76■□□□□ 0.27
CHFR-204ENST00000443047 FAM153AQ9UHL3 310 aa16.76■□□□□ 0.27
CHFR-204ENST00000443047 TNRC6CQ9HCJ0 1690 aaKnown RBP16.76■□□□□ 0.27
CHFR-204ENST00000443047 ZSCAN5CA6NGD5 496 aaPredicted RBP16.75■□□□□ 0.27
CHFR-204ENST00000443047 FAM107AO95990 144 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 SNX1Q13596 522 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 CUL4BQ13620 913 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 TMTC3Q6ZXV5 915 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 RASGRP4Q8TDF6 673 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 NSMCE1Q8WV22 266 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 STAMBPL1Q96FJ0 436 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 PHF20Q9BVI0 1012 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 CPSF2Q9P2I0 782 aaKnown RBP16.75■□□□□ 0.27
CHFR-204ENST00000443047 ATXN2Q99700 1313 aaKnown RBP16.75■□□□□ 0.27
CHFR-204ENST00000443047 MPHOSPH10O00566 681 aaKnown RBP16.75■□□□□ 0.27
CHFR-204ENST00000443047 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
CHFR-204ENST00000443047 KRT2P35908 639 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 NPY5RQ15761 445 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 CCDC50Q8IVM0 306 aa16.75■□□□□ 0.27
CHFR-204ENST00000443047 EPB41P11171 864 aaKnown RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 GPSM2P81274 684 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 GRIK3Q13003 919 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 PRR5LQ6MZQ0 368 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 HIBCHQ6NVY1 386 aaPredicted RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 KDM7AQ6ZMT4 941 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 PNMA8AQ86V59 439 aaPredicted RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 RASSF8Q8NHQ8 419 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 ATP6V0A4Q9HBG4 840 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 IL17RBQ9NRM6 502 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 SEMA3EO15041 775 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 PRPF3O43395 683 aaKnown RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 SLC8A1P32418 973 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 VAV2P52735 878 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 PPP1R7Q15435 360 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 KCTD19Q17RG1 926 aaPredicted RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 CCDC96Q2M329 555 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 ODF2Q5BJF6 829 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 MSL1Q68DK7 614 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 TLDC1Q6P9B6 456 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 PIK3AP1Q6ZUJ8 805 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 LMBR1Q8WVP7 490 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 STIM2Q9P246 746 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 IRS2Q9Y4H2 1338 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 TRIM75PA6NK02 468 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 KCNJ18B7U540 433 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 PPP1R3GB7ZBB8 358 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 FGRP09769 529 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 CARSP49589 748 aaKnown RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 KRT83P78385 493 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 GRAPQ13588 217 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 KCNJ12Q14500 433 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 PLCB4Q15147 1175 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 C8orf74Q6P047 294 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 NFRKBQ6P4R8 1299 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHFR-204ENST00000443047 CREG2Q8IUH2 290 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 GJD4Q96KN9 370 aaPredicted RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 PCMTD1Q96MG8 357 aaPredicted RBP16.74■□□□□ 0.27
CHFR-204ENST00000443047 L3MBTL1Q9Y468 752 aa16.74■□□□□ 0.27
CHFR-204ENST00000443047 CLTAP09496 248 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 GOLGA8HP0CJ92 632 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 TMOD1P28289 359 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 QPCTQ16769 361 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 EMBQ6PCB8 327 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 EHBP1Q8NDI1 1231 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 TCP11Q8WWU5 503 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
CHFR-204ENST00000443047 KLHL33A6NCF5 533 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 RNASE9P60153 205 aaKnown RBP16.73■□□□□ 0.27
CHFR-204ENST00000443047 KIF5AQ12840 1032 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 GRIPAP1Q4V328 841 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 SH3GL3Q99963 347 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 ATP8A2Q9NTI2 1148 aa16.73■□□□□ 0.27
CHFR-204ENST00000443047 SRPRBQ9Y5M8 271 aaKnown RBP16.73■□□□□ 0.27
CHFR-204ENST00000443047 UFL1O94874 794 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 FECHP22830 423 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 SCTRP47872 440 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 NLRP5P59047 1200 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 KRT26Q7Z3Y9 468 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 SPDYE1Q8NFV5 336 aaPredicted RBP16.72■□□□□ 0.27
CHFR-204ENST00000443047 SYMPKQ92797 1274 aaKnown RBP16.72■□□□□ 0.27
CHFR-204ENST00000443047 SAAL1Q96ER3 474 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 MTA3Q9BTC8 594 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 YIPF3Q9GZM5 350 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 ACTR5Q9H9F9 607 aaPredicted RBP16.72■□□□□ 0.27
CHFR-204ENST00000443047 EPB41L5Q9HCM4 733 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 IRAK4Q9NWZ3 460 aa16.72■□□□□ 0.27
CHFR-204ENST00000443047 ITIH6Q6UXX5 1313 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms