RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 PDCD2LQ9BRP1 358 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 SPZ1Q9BXG8 430 aa20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 SEC63Q9UGP8 760 aaKnown RBP20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 DDX41Q9UJV9 622 aaKnown RBP20.3■□□□□ 0.84
SBDSP1-203ENST00000437201 FGBP02675 491 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 TGFB3P10600 412 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 MYCLP12524 364 aaPredicted RBP20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 CCND2P30279 289 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 HOXA13P31271 388 aaPredicted RBP20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 ARHGAP1Q07960 439 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 DGKDQ16760 1214 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 ZNF365Q70YC5 407 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 C16orf59Q7L2K0 433 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 VSIG10LQ86VR7 867 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 SLC17A8Q8NDX2 589 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 FAM161BQ96MY7 647 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 SEMA6BQ9H3T3 888 aa20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 TRMT13Q9NUP7 481 aaKnown RBP20.29■□□□□ 0.84
SBDSP1-203ENST00000437201 SH2B2O14492 632 aaPredicted RBP20.28■□□□□ 0.84
SBDSP1-203ENST00000437201 MMP3P08254 477 aa20.28■□□□□ 0.84
SBDSP1-203ENST00000437201 PGM5Q15124 567 aa20.28■□□□□ 0.84
SBDSP1-203ENST00000437201 SLC35G1Q2M3R5 365 aa20.28■□□□□ 0.84
SBDSP1-203ENST00000437201 DHX37Q8IY37 1157 aaKnown RBP20.28■□□□□ 0.84
SBDSP1-203ENST00000437201 CUL5Q93034 780 aa20.28■□□□□ 0.84
SBDSP1-203ENST00000437201 NOD1Q9Y239 953 aa20.28■□□□□ 0.84
SBDSP1-203ENST00000437201 SLC12A7Q9Y666 1083 aa20.28■□□□□ 0.84
SBDSP1-203ENST00000437201 STAM2O75886 525 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 PFKMP08237 780 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 ACRP10323 421 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 CCL23P55773 120 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 SYNE3Q6ZMZ3 975 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 FCHSD1Q86WN1 690 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 PPTC7Q8NI37 304 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 HERVK_113Q902F9 699 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 GUCD1Q96NT3 240 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 KATNAL1Q9BW62 490 aa20.27■□□□□ 0.84
SBDSP1-203ENST00000437201 CDC45O75419 566 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 BFSP2Q13515 415 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 GNPTABQ3T906 1256 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 RASIP1Q5U651 963 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 CCDC155Q8N6L0 562 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 RETREG2Q8NC44 543 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 PIBF1Q8WXW3 757 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 MYL10Q9BUA6 226 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 UMODL1Q5DID0 1318 aa20.26■□□□□ 0.83
SBDSP1-203ENST00000437201 PITPNM1O00562 1244 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 CYP2C9P11712 490 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 DNAJB2P25686 324 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 RFC2P35250 354 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 CHMP4BP1P59074 171 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 SESTD1Q86VW0 696 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 SMARCC2Q8TAQ2 1214 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 CCDC136Q96JN2 1154 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 WNT8AQ9H1J5 351 aa20.25■□□□□ 0.83
SBDSP1-203ENST00000437201 PPFIA4O75335 1185 aa20.24■□□□□ 0.83
SBDSP1-203ENST00000437201 KRT32Q14532 448 aa20.24■□□□□ 0.83
SBDSP1-203ENST00000437201 XRRA1Q6P2D8 792 aa20.24■□□□□ 0.83
SBDSP1-203ENST00000437201 SGMS1Q86VZ5 419 aa20.24■□□□□ 0.83
SBDSP1-203ENST00000437201 FANCBQ8NB91 859 aa20.24■□□□□ 0.83
SBDSP1-203ENST00000437201 NEK1Q96PY6 1258 aa20.24■□□□□ 0.83
SBDSP1-203ENST00000437201 CDX2Q99626 313 aaPredicted RBP20.24■□□□□ 0.83
SBDSP1-203ENST00000437201 SCN10AQ9Y5Y9 1956 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 PIK3CDO00329 1044 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 RGS20O76081 388 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 RAB30Q15771 203 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 PTGISQ16647 500 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 TSGA10IPQ3SY00 556 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 CELF3Q5SZQ8 465 aaKnown RBP20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 MYSM1Q5VVJ2 828 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 C7orf31Q8N865 590 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 TIFAQ96CG3 184 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 SPATA33Q96N06 139 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 TTYH1Q9H313 450 aaPredicted RBP20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 MLXIPQ9HAP2 919 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 MSRAQ9UJ68 235 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 KIAA1217Q5T5P2 1943 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 COL6A3P12111 3177 aa20.23■□□□□ 0.83
SBDSP1-203ENST00000437201 GGPS1O95749 300 aa20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 HMGB1P09429 215 aaKnown RBP20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 ACTN1P12814 892 aa20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 OTOP2Q7RTS6 562 aa20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 IL31RAQ8NI17 732 aa20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 CAGE1Q8TC20 777 aa20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 SCLYQ96I15 445 aa20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 SLC4A7Q9Y6M7 1214 aa20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 FRMPD4Q14CM0 1322 aa20.22■□□□□ 0.83
SBDSP1-203ENST00000437201 PLEKHA8P1O95397 391 aa20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 HOXD8P13378 290 aaPredicted RBP20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 PSEN2P49810 448 aa20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 NEDD9Q14511 834 aa20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 DHX32Q7L7V1 743 aaKnown RBP20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 KAT2BQ92831 832 aa20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 LRRC2Q9BYS8 371 aa20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 ZNF576Q9H609 170 aa20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 PSTPIP2Q9H939 334 aa20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 RBM28Q9NW13 759 aaKnown RBP20.21■□□□□ 0.83
SBDSP1-203ENST00000437201 BAZ2BQ9UIF8 2168 aaKnown RBP20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 PARNO95453 639 aaKnown RBP20.2■□□□□ 0.82
SBDSP1-203ENST00000437201 F2P00734 622 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms