RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 ITGB8P26012 769 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 CYP2C18P33260 490 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 PSMC6P62333 389 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 IRX5P78411 483 aaPredicted RBP10.54□□□□□ -0.72
HDAC9-211ENST00000430454 RAB30Q15771 203 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 CCDC62Q6P9F0 684 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 TEX2Q8IWB9 1127 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 SLC17A8Q8NDX2 589 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 SMARCC2Q8TAQ2 1214 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 TBC1D5Q92609 795 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 EMID1Q96A84 441 aaPredicted RBP10.54□□□□□ -0.72
HDAC9-211ENST00000430454 LSG1Q9H089 658 aaKnown RBP10.54□□□□□ -0.72
HDAC9-211ENST00000430454 TRPV6Q9H1D0 765 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 LY9Q9HBG7 655 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 LAMA3Q16787 3333 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 SZT2Q5T011 3432 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 SH2B2O14492 632 aaPredicted RBP10.53□□□□□ -0.72
HDAC9-211ENST00000430454 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 PARNO95453 639 aaKnown RBP10.53□□□□□ -0.72
HDAC9-211ENST00000430454 CSF2RAP15509 400 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 CHMP4BP1P59074 171 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 FGD1P98174 961 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 NECTIN1Q15223 517 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 NBPF20Q3BBV1 942 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 Q7L0L9 218 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 VSIG10LQ86VR7 867 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 FCHSD1Q86WN1 690 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 C7orf31Q8N865 590 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 GIMAP8Q8ND71 665 aaPredicted RBP10.53□□□□□ -0.72
HDAC9-211ENST00000430454 PPTC7Q8NI37 304 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 AFG1LQ8WV93 481 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 NEK1Q96PY6 1258 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 PDCD2LQ9BRP1 358 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 NOC4LQ9BVI4 516 aaKnown RBP10.53□□□□□ -0.72
HDAC9-211ENST00000430454 EHMT1Q9H9B1 1298 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 MLXIPQ9HAP2 919 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 RBM28Q9NW13 759 aaKnown RBP10.53□□□□□ -0.72
HDAC9-211ENST00000430454 COL20A1Q9P218 1284 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 MSRAQ9UJ68 235 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 DDX41Q9UJV9 622 aaKnown RBP10.53□□□□□ -0.72
HDAC9-211ENST00000430454 GRIN2DO15399 1336 aa10.53□□□□□ -0.72
HDAC9-211ENST00000430454 LAMA2P24043 3122 aaKnown RBP10.53□□□□□ -0.72
HDAC9-211ENST00000430454 NOP56O00567 594 aaKnown RBP10.52□□□□□ -0.73
HDAC9-211ENST00000430454 MMP3P08254 477 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 HOXA13P31271 388 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-211ENST00000430454 EPHB4P54760 987 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 ANTXR2P58335 489 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 ARHGAP1Q07960 439 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 NEDD9Q14511 834 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 PGM5Q15124 567 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 LY6KQ17RY6 165 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 TMEM240Q5SV17 173 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 TMEM63BQ5T3F8 832 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 ZNF365Q70YC5 407 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 NLRX1Q86UT6 975 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 SESTD1Q86VW0 696 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 CAGE1Q8TC20 777 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 HERVK_113Q902F9 699 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 CDHR1Q96JP9 859 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 SPATA33Q96N06 139 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
HDAC9-211ENST00000430454 SEMA6BQ9H3T3 888 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 TRMT13Q9NUP7 481 aaKnown RBP10.52□□□□□ -0.73
HDAC9-211ENST00000430454 SLC4A7Q9Y6M7 1214 aa10.52□□□□□ -0.73
HDAC9-211ENST00000430454 CCDC196A0A1B0GTZ2 297 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 PIK3CDO00329 1044 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 CYTH3O43739 400 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
HDAC9-211ENST00000430454 REC8O95072 547 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 CCL23P55773 120 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 PTGISQ16647 500 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 CELF3Q5SZQ8 465 aaKnown RBP10.51□□□□□ -0.73
HDAC9-211ENST00000430454 DHX32Q7L7V1 743 aaKnown RBP10.51□□□□□ -0.73
HDAC9-211ENST00000430454 SGMS1Q86VZ5 419 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 AFAP1L1Q8TED9 768 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 COPS5Q92905 334 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 TIFAQ96CG3 184 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 GLT8D2Q9H1C3 349 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 PSTPIP2Q9H939 334 aa10.51□□□□□ -0.73
HDAC9-211ENST00000430454 MYH6P13533 1939 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 SPDYE3A6NKU9 549 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 ZBBXA8MT70 800 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 OPLAHO14841 1288 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 FIBPO43427 364 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 ARIH2O95376 493 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 GGPS1O95749 300 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 ACRP10323 421 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 GNAT1P11488 350 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 CYP2C9P11712 490 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 DNAJB2P25686 324 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 PSEN2P49810 448 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 MFSD10Q14728 455 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 TSGA10IPQ3SY00 556 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 FAM161BQ96MY7 647 aa10.5□□□□□ -0.73
HDAC9-211ENST00000430454 FTOQ9C0B1 505 aaKnown RBP eCLIP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms