RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 RC3H1Q5TC82 1133 aaKnown RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 C8orf74Q6P047 294 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 NFRKBQ6P4R8 1299 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 KRT25Q7Z3Z0 450 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 ADSSL1Q8N142 457 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 MICALL1Q8N3F8 863 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 TTLL6Q8N841 843 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 PROCA1Q8NCQ7 364 aaPredicted RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 WDR66Q8TBY9 1149 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 RASSF4Q9H2L5 321 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 ZNF277Q9NRM2 450 aaPredicted RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 KCND1Q9NSA2 647 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 GOLGA6AQ9NYA3 693 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 PACSIN2Q9UNF0 486 aaPredicted RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 ATP2C2O75185 946 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 CCNE1P24864 410 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 EEF1GP26641 437 aaKnown RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 ACTN2P35609 894 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 GSTO1P78417 241 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 PLS1Q14651 629 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 GRIK5Q16478 980 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 BEND6Q5SZJ8 279 aaPredicted RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 DPP8Q6V1X1 898 aaPredicted RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 KCTD1Q719H9 257 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 NWD2Q9ULI1 1742 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 CNTNAP4Q9C0A0 1308 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 YBX3P16989 372 aaKnown RBP eCLIP8.92□□□□□ -0.98
HPS4-205ENST00000429411 MCM3P25205 808 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 HPDP32754 393 aaPredicted RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 PSEN1P49768 467 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 MKRN3Q13064 507 aaKnown RBP8.92□□□□□ -0.98
HPS4-205ENST00000429411 USH1GQ495M9 461 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 FAM76AQ8TAV0 307 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 CEP95Q96GE4 821 aa8.92□□□□□ -0.98
HPS4-205ENST00000429411 MEIS1O00470 390 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 ATP8B1O43520 1251 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 FGFR1OPO95684 399 aaKnown RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 CDK8P49336 464 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 GFPT1Q06210 699 aaPredicted RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 FUT2Q10981 343 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 EAPPQ56P03 285 aaPredicted RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 FOXR1Q6PIV2 292 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 DNAAF5Q86Y56 855 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 ZNF384Q8TF68 577 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 TRIM31Q9BZY9 425 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 LUC7LQ9NQ29 371 aaKnown RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 IL17RBQ9NRM6 502 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 RRP15Q9Y3B9 282 aaKnown RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 POLRMTO00411 1230 aaKnown RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 HSF2BPO75031 334 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 SLURP2P0DP57 97 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 GGCXP38435 758 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 ADCY7P51828 1080 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 KIF11P52732 1056 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 CYP4A11Q02928 519 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 EHHADHQ08426 723 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 RNF187Q5TA31 235 aaPredicted RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 ARL6IP4Q66PJ3 421 aaKnown RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 ADAT2Q7Z6V5 191 aaKnown RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 LARP4BQ92615 738 aaKnown RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 LSM14BQ9BX40 385 aaKnown RBP8.91□□□□□ -0.98
HPS4-205ENST00000429411 TRIM9Q9C026 710 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 NDST4Q9H3R1 872 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 SAMM50Q9Y512 469 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 COL18A1P39060 1754 aa8.91□□□□□ -0.98
HPS4-205ENST00000429411 ANKRD62A6NC57 917 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 LRRC53A6NM62 1247 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 MYO1CO00159 1063 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 SEMA3EO15041 775 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 CHMP2AO43633 222 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 HMGB2P26583 209 aaKnown RBP8.9□□□□□ -0.98
HPS4-205ENST00000429411 CACNB3P54284 484 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 ZBED6P86452 979 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 E2F4Q16254 413 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 DOK7Q18PE1 504 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 C12orf60Q5U649 245 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 SH3RF1Q7Z6J0 888 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 MICAL1Q8TDZ2 1067 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 EXOC4Q96A65 974 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 MS4A14Q96JA4 679 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 NUP58Q9BVL2 599 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 MYH2Q9UKX2 1941 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 SHTN1A0MZ66 631 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 CYTH3O43739 400 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 IVLP07476 585 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 USP8P40818 1118 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 ARHGAP25P42331 645 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 CCT5P48643 541 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 HERVK_113P62684 666 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 APBA1Q02410 837 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 ZNF662Q6ZS27 426 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 EP400NLQ6ZTU2 488 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 DGKHQ86XP1 1220 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 GOLGA5Q8TBA6 731 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 SELENOOQ9BVL4 669 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 GOPCQ9HD26 462 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 LCMT1Q9UIC8 334 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 ANAPC4Q9UJX5 808 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 KIAA1024Q9UPX6 916 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms