RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 EHHADHQ08426 723 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 KRT27Q7Z3Y8 459 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 GIMAP8Q8ND71 665 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 ZNF507Q8TCN5 953 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 MTRQ99707 1265 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 NDST4Q9H3R1 872 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 ATRNO75882 1429 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 KLRF2D3W0D1 207 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 RHOBTB3O94955 611 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 PFKFB3Q16875 520 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 VWA3BQ502W6 1294 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 NLRP14Q86W24 1093 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 ZNF473Q8WTR7 871 aaKnown RBP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 GPR101Q96P66 508 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 RNF14Q9UBS8 474 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 PCDHA4Q9UN74 947 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 BCS1LQ9Y276 419 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 RIC1Q4ADV7 1423 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 LRRC53A6NM62 1247 aa11.27□□□□□ -0.6
CTCFL-206ENST00000426658 GNA11P29992 359 aa11.27□□□□□ -0.6
CTCFL-206ENST00000426658 SEC24CP53992 1094 aa11.27□□□□□ -0.6
CTCFL-206ENST00000426658 TTMPQ5BVD1 217 aa11.27□□□□□ -0.6
CTCFL-206ENST00000426658 HAUS3Q68CZ6 603 aa11.27□□□□□ -0.6
CTCFL-206ENST00000426658 TTI2Q6NXR4 508 aa11.27□□□□□ -0.6
CTCFL-206ENST00000426658 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.27□□□□□ -0.6
CTCFL-206ENST00000426658 LRRC45Q96CN5 670 aa11.27□□□□□ -0.6
CTCFL-206ENST00000426658 SPEF2Q9C093 1822 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 WTIPA6NIX2 430 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-206ENST00000426658 HMGB1P1B2RPK0 211 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-206ENST00000426658 CTNNA1P35221 906 aaKnown RBP11.27□□□□□ -0.61
CTCFL-206ENST00000426658 GFPT1Q06210 699 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-206ENST00000426658 TROAPQ12815 778 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 NEDD9Q14511 834 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 GPR162Q16538 588 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 NAA35Q5VZE5 725 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 RUFY4Q6ZNE9 571 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 ZNF662Q6ZS27 426 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 CCT8L2Q96SF2 557 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 TCEAL9Q9UHQ7 104 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 SKOR1P84550 965 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 HERC4Q5GLZ8 1057 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-206ENST00000426658 USP17L2Q6R6M4 530 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 ADAT2Q7Z6V5 191 aaKnown RBP11.27□□□□□ -0.61
CTCFL-206ENST00000426658 TEX11Q8IYF3 940 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 WHAMMQ8TF30 809 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 CUEDC2Q9H467 287 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.27□□□□□ -0.617e-7■■■■■ 79
CTCFL-206ENST00000426658 PLAAQ9Y263 795 aa11.27□□□□□ -0.61
CTCFL-206ENST00000426658 KCNQ2O43526 872 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 CEP104O60308 925 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 FCER1AP12319 257 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 PRLRP16471 622 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 GBP2P32456 591 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 MAN2A1Q16706 1144 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 ERFEQ4G0M1 354 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 VGLL2Q8N8G2 317 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 ATP6V1G3Q96LB4 118 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 ZNF408Q9H9D4 720 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 CNTNAP5Q8WYK1 1306 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 HGSO14964 777 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 RPS8P62241 208 aaKnown RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 STK4Q13043 487 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 MAGEF1Q9HAY2 307 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 KLC4Q9NSK0 619 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 SPATA31A3Q5VYP0 1347 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 KCNK3O14649 394 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 OR52Z1P0C646 297 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 EPB41P11171 864 aaKnown RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 MDH1P40925 334 aaKnown RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 MECOMQ03112 1051 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 PLS1Q14651 629 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 RPS6KA1Q15418 735 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 SNCBQ16143 134 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 CALCRLQ16602 461 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 KDM7AQ6ZMT4 941 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 CNPY4Q8N129 248 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 REXO1Q8N1G1 1221 aaKnown RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 LRRC47Q8N1G4 583 aaKnown RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 CAVIN3Q969G5 261 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 SH3GL2Q99962 352 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 CD248Q9HCU0 757 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 PLAGL2Q9UPG8 496 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 PALMO75781 387 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 LDHCP07864 332 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 PCP11498 1178 aaKnown RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 POLR2FP61218 127 aaKnown RBP11.26□□□□□ -0.61
CTCFL-206ENST00000426658 ITIH3Q06033 890 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 IL17AQ16552 155 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 KIAA0753Q2KHM9 967 aa11.26□□□□□ -0.61
CTCFL-206ENST00000426658 CACNA2D3Q8IZS8 1091 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms